Protein

View in Explore
Genbank accession
QFG06495.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MAIDFPNSPALSEIFNFGGSSYIWNGTAWVGYATDLVVNYNASSIVISSADVPVGATTTLNFDSSFFVEYDDVGIATISGGGGAGAGGTTGTWTLGANGTSDFTFTGPGLTGTENDPTLYLVRGQSYNFQSSLGATHPFRIQSTPNGSTGTQYNDGITNNDLQNGTLVWDVQFDAPDILYYQCTNHGNMGGPIYIVGESPNKELTQLQVTGVATITNGRIQANAASNLRFGNIAAGSGSGRNIAIGDQVLGSLSSGNGRNIGIGELSLNNVTSGGYNVGLGIKAGQLITNGQYNVVLGGYDGNSGNLDIRGLSNRVVIADGEGNIRQYINNSGRTGINTTVLTDMLTVGGSVTATSYSGSGVGLTGLPAGQLTGALPALDGSALTGVSAVGSGIEIKDSGAAVGSAATVDFSTGLDVTPVSAGVVTVTAAIPGISTTGTSGLNDVTANALTVNGDLDVTGHTELDQVNITGYTTVSNTVKFGDTNLLRFGDNEDFGITFNGTNSFIGGNLDKGGDLFINTPNDGSGKVQIQRGTFFNKMAVFNDGGSVDLYHNNALRLQTATGGITVYGNVALSGSGSHFVGSGAGLTSIPSNQLTGALPAIDGSALLNVNATGDGVVVENSGSNVGSAKTINFDTGLDVTYSSGIATVTASGGSLQNRTTVSASTTSIADNAVGLVTVTGFKSYALMKVGLSTAGWIRIYTDSASRTADSSRSVGEDPAAGSGVIAEVVTTGISTEQKISPFTMGGNMDDPVDTTIYMAITNLSGTTQSINANLTILQLEA
Physico‐chemical
properties
protein length:782 AA
molecular weight: 79167,97850 Da
isoelectric point:4,24038
aromaticity:0,06777
hydropathy:0,02442

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFG06495.1 [NCBI]
Genbank nucleotide accession
MK867354 [NCBI]
CDS location
range 198356 -> 200704
strand +
CDS
ATGGCAATAGATTTTCCTAATTCTCCAGCGTTAAGTGAAATTTTTAATTTTGGAGGTAGTTCTTACATTTGGAATGGAACTGCATGGGTAGGATATGCTACTGATCTTGTAGTAAATTATAATGCATCATCTATTGTTATATCAAGTGCTGATGTTCCAGTTGGTGCTACTACAACATTGAACTTTGATAGTTCATTTTTTGTAGAGTATGATGATGTAGGTATTGCAACTATAAGTGGTGGAGGTGGAGCAGGTGCTGGTGGAACAACTGGAACTTGGACATTAGGTGCTAATGGAACTAGTGATTTTACATTCACTGGTCCTGGTCTAACTGGTACAGAGAATGATCCAACACTTTATTTGGTAAGAGGTCAGTCATATAACTTCCAAAGTTCATTAGGTGCTACGCATCCATTTAGAATTCAAAGCACTCCAAATGGATCTACTGGTACACAATATAATGATGGTATTACAAATAACGATCTTCAGAACGGAACTCTAGTATGGGACGTTCAGTTTGATGCACCTGACATTCTATATTACCAATGCACTAACCATGGTAATATGGGTGGTCCAATTTATATTGTTGGAGAATCACCTAACAAAGAACTTACACAACTTCAAGTCACTGGTGTTGCTACAATTACCAATGGCAGAATTCAAGCAAATGCTGCATCTAACCTAAGATTTGGTAACATTGCTGCTGGATCTGGTAGTGGTAGAAACATTGCAATCGGTGATCAGGTTCTAGGTTCACTCTCCAGTGGTAATGGTAGAAACATTGGTATTGGTGAACTCTCACTCAATAATGTAACCTCTGGTGGATATAACGTTGGTCTAGGTATCAAAGCAGGACAACTGATTACTAATGGACAATATAACGTTGTTCTTGGTGGATATGATGGTAACTCTGGTAATCTAGACATCAGAGGTTTATCTAACCGAGTTGTTATTGCTGATGGTGAAGGAAATATTAGACAATACATCAATAACTCTGGAAGAACTGGTATCAATACAACAGTTCTCACAGATATGCTAACTGTTGGTGGTAGTGTTACTGCTACATCTTACTCTGGTTCTGGTGTTGGACTTACAGGATTGCCTGCTGGACAACTCACAGGAGCACTACCTGCACTCGACGGTTCTGCACTTACTGGTGTATCTGCTGTTGGATCTGGTATTGAAATTAAAGATAGTGGTGCAGCAGTTGGTTCTGCTGCAACGGTCGATTTCTCTACTGGTTTAGATGTAACTCCAGTATCTGCTGGTGTTGTTACTGTTACAGCAGCTATTCCTGGTATCAGCACAACAGGAACTTCAGGACTTAATGATGTTACTGCAAATGCATTAACAGTTAATGGTGATTTGGATGTAACAGGTCACACTGAACTTGATCAGGTGAACATAACTGGATATACTACAGTTTCTAATACTGTTAAATTTGGTGACACAAATTTATTAAGATTTGGAGATAATGAAGATTTTGGAATCACTTTTAACGGAACTAATTCGTTTATTGGTGGTAATCTTGATAAGGGTGGTGATTTATTCATTAATACACCTAACGATGGTAGTGGAAAAGTTCAAATTCAAAGAGGAACATTTTTCAATAAAATGGCCGTCTTCAATGATGGTGGTAGTGTAGATCTTTATCATAACAATGCATTAAGACTTCAAACAGCAACTGGTGGTATTACTGTTTATGGTAATGTAGCACTTTCTGGTTCTGGTTCACATTTTGTTGGTTCTGGTGCTGGTCTTACAAGTATTCCTTCAAATCAACTTACTGGTGCATTACCTGCTATTGATGGATCTGCACTATTAAATGTCAACGCAACTGGTGATGGTGTCGTTGTTGAAAACAGTGGATCAAACGTTGGTTCAGCAAAGACTATCAACTTTGATACTGGTCTAGATGTTACTTACAGTTCTGGTATTGCTACTGTTACTGCATCTGGTGGTTCACTACAAAACAGAACAACAGTTTCTGCATCCACAACATCTATTGCAGACAATGCTGTAGGACTTGTAACAGTTACTGGATTTAAGTCTTATGCCCTGATGAAGGTTGGTTTATCTACAGCAGGTTGGATCAGAATATATACCGATAGTGCATCTAGAACTGCTGATTCTAGTAGAAGTGTTGGAGAAGATCCAGCAGCAGGAAGTGGAGTTATTGCTGAAGTTGTAACGACAGGCATCTCTACTGAACAAAAGATCTCTCCATTCACAATGGGTGGAAATATGGACGATCCAGTTGATACCACAATCTATATGGCAATCACAAATCTGTCTGGAACTACACAATCAATCAACGCAAACCTAACCATTCTTCAACTGGAGGCATAA

Tertiary structure

PDB ID
f117452b527d5e6d2d697795e305fb17bc596108bcad9f4c63b84fe504e60595
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6497
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank