Protein

View in Explore
Genbank accession
AVJ51920.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,51
Protein sequence
MALISQAIKNLKGGISQQPDILRYPDQGSRQVNGWSSESEGLQKRPPMVFIKTLGDQAALGKSPYIHLINRDEYERYYVVFTGSGIRVFDLAGNEKAVRYSANKSYITTATPREDLRMVTVADYTFIVNRNYTVASGGSINMHGFNPKQDALINVRGGQYGRTLQVMINGGTQATYRIPNGDNPTHVQNTDAQWLAEELAKQLRVNLPAWSFTVGQGYIHIVAPAGQQIDSLVTKDGYADQLISPVTHYAQTFTKLPLNAPDGYIVKIVGDTAKSADQYYVKYDASRKVWSEVVGWNVEVNLRAETMPHALVRAADGNFEFKTLSWSDRKCGDNDTNPWPSFVDSTINDVFFFRNRLGFLTGENIVLSRTGKYFNFFPASVANLSDDDPIDVAVSVNRISILKYAVPFSEELLIWSDETQFVLTSAGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSFTSISRYYAVQDVSSVKNAEDITAHVPNYIPNGVFAICGSGTENFCSVLTDGDPSKIFIYKFLYLNEELRQQSWSHWDFGPNVQVLACQAIGSDMYVVMRNQYNTFMSRISFTKNAIDIVGEPYRAYLDFKVAYTIPAGTYNDDTYETTINLSTIYGARFDRGEVTLLEPDGRSHTFEDPDGGWANEPLIRLTGNMEGKRVFLGFNFAFVYEFSKFLIKQTADDGSTATEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGGRLGSNSLRASKLNLGTGQYRFPVAGNAKFTTVFITSDEATPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88698,24550 Da
isoelectric point:5,67886
aromaticity:0,12232
hydropathy:-0,31665

Domains

Domains [InterPro]
IPR058003
1–793
IPR058003
AVJ51920.1
1 793
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ebrios
[NCBI] 		2099356 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVJ51920.1 [NCBI]
Genbank nucleotide accession
MG966531.1 [NCBI]
CDS location
range 24322 -> 26703
strand +
CDS
ATGGCTCTAATTTCTCAAGCCATTAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGCTATCCCGACCAAGGCTCTCGCCAAGTCAATGGGTGGTCTTCGGAGTCTGAGGGTCTTCAAAAGCGCCCTCCTATGGTGTTCATCAAGACCCTTGGCGACCAAGCCGCTTTGGGTAAGTCTCCGTACATCCACTTGATTAACCGTGACGAATACGAGCGGTACTACGTTGTGTTCACTGGTAGCGGTATCCGAGTGTTCGACCTTGCTGGTAACGAGAAGGCTGTCCGGTACAGCGCGAACAAATCATACATCACCACGGCCACTCCAAGGGAAGACCTTCGGATGGTAACGGTGGCTGACTACACGTTCATCGTGAACAGGAACTACACTGTTGCTTCCGGCGGTTCCATCAACATGCACGGGTTCAACCCTAAGCAGGACGCCTTGATTAACGTTCGAGGTGGCCAGTATGGACGAACTCTGCAAGTGATGATTAACGGTGGCACTCAGGCGACCTACCGGATTCCAAATGGTGACAACCCTACGCACGTTCAGAATACCGATGCCCAATGGCTGGCAGAGGAGCTAGCCAAACAGTTGCGAGTCAACCTCCCTGCGTGGTCATTCACAGTCGGCCAAGGGTACATCCACATCGTGGCCCCTGCTGGTCAACAGATTGATTCCCTTGTGACGAAGGATGGTTACGCTGACCAGCTAATCAGTCCCGTGACTCACTACGCCCAGACCTTCACTAAGTTGCCGCTCAACGCTCCCGATGGGTACATCGTGAAGATTGTTGGGGACACCGCTAAGTCTGCCGACCAGTATTACGTGAAGTACGATGCGTCCCGTAAGGTCTGGTCTGAGGTTGTTGGGTGGAACGTGGAGGTTAACCTTCGGGCCGAGACGATGCCACATGCGCTCGTTCGGGCTGCTGATGGTAACTTCGAGTTCAAGACGCTGAGCTGGTCTGACCGGAAGTGCGGTGACAACGACACTAACCCGTGGCCCTCATTTGTTGACTCGACCATCAACGATGTGTTCTTCTTCCGTAACCGTCTGGGCTTCCTGACTGGCGAGAACATCGTGCTCAGTCGAACCGGTAAATACTTCAACTTCTTCCCTGCGTCCGTTGCGAACCTTAGCGATGATGACCCGATTGACGTTGCTGTGAGTGTGAACCGGATTTCCATCTTGAAGTACGCCGTTCCGTTCTCTGAGGAGCTGCTGATTTGGTCTGACGAGACTCAGTTCGTGTTGACCTCTGCGGGAACCTTAACGTCCCGTTCGGTTGAGCTGAACCTGACCACTCAGTTCGATGTGCAAGACCGAGCTCGTCCCTACGGGATTGGTCGTAACGTGTACTTTGCGAGCCCACGGTCTAGCTTTACGTCCATCAGCCGTTACTATGCGGTGCAGGATGTAAGTTCCGTGAAGAACGCCGAGGACATTACCGCCCACGTCCCGAACTACATCCCGAATGGTGTGTTCGCCATCTGTGGCTCTGGAACCGAGAACTTCTGCTCAGTGCTGACCGATGGAGACCCTAGCAAGATTTTCATCTACAAGTTCCTGTACCTCAACGAGGAGCTTCGCCAACAGTCTTGGTCTCACTGGGACTTTGGGCCGAACGTTCAGGTACTCGCTTGTCAAGCTATCGGGTCTGACATGTACGTGGTGATGCGGAACCAATATAACACCTTTATGTCTCGAATATCTTTCACTAAGAACGCCATCGACATCGTTGGGGAGCCTTACCGAGCCTATCTGGACTTCAAGGTTGCCTACACGATTCCCGCTGGTACTTACAACGATGATACCTACGAGACAACAATCAATCTCTCGACCATCTACGGTGCTCGTTTTGACCGTGGTGAGGTGACTCTTCTGGAGCCTGATGGTCGTTCCCACACCTTTGAAGACCCCGATGGCGGCTGGGCCAATGAGCCGCTGATTCGCCTAACGGGTAACATGGAGGGCAAGAGGGTGTTCCTTGGTTTCAACTTCGCGTTCGTCTATGAGTTCTCGAAGTTCCTCATTAAGCAGACCGCCGATGACGGTTCAACCGCTACCGAGGACATTGGGCGACTCCAACTGCGAAGGGCATGGGTGAACTACGAGGACTCTGGCACCTTCGACATCTACGTGGAGAACCAATCGTCAAACTGGAAGTACACGATGGCTGGTGGCCGCTTGGGCTCCAACTCGCTGAGGGCCAGTAAGTTGAACCTTGGCACGGGCCAGTACCGATTCCCTGTAGCGGGGAACGCCAAGTTCACTACGGTCTTCATCACGTCTGACGAGGCCACACCGCTGAACGTTATCGGCTGTGGCTGGGAAGGCAACTACCTGCGCCGGAGTTCCGGCATCTAA

Tertiary structure

PDB ID
8c0a3d8001e008a477861408d6b2dd0674344d216e3bcf0c8590bff9827483d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9157
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Ebrios, a novel T7-like phage isolated from the Lagoon Ebrie in Abidjan Ngazoa-Kakou,S., Philippe,C., Tremblay,D.M., Loignon,S., Koudou,A., Abole,A., Coulibaly,D.N., Kan Kouassi,S., Kouame-Sina,M., Aoussi,S., Dosso,M. and Moineau,S. 2018-06-21 — GenBank