Protein

View in Explore
Genbank accession
YP_009600165.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,69
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFRRLGDLIGRYIGIGGATGDATNPLSVRGAGALFDGDSGGHQVRINKSGVSDTASFLFQRGFSGRAEFGLIGNDNFELKVSADGSAFNQAFIVDDGTAVTDFKQQPTYLGAALYSTSDFTLSDVARRSGGNTFTGAQTFQGSMNVTAAGSFESAFTTTDASLHDVGLRIGGARTASSSSDIAYVKLANTTAENYDLAQIVAQDPSANSTLENGRLIFRTSASGTLTDALLLNSDNTAAFYGEVTISGATVWHADNDGAGSGLDADLLDGNQASAFAFLTGATFTGGVTATTFSGNGSSLTNLNASNLASGTVPAARLPAVTNTADQHANATGNWHTFVNDGGGNIGMRWNATPGGTNTLVEGNATAGGHAWMLRIDNDNALGDLFWRRGSTATSQAGETITWDNWLVFDGGLDRAEWFKDLDLNNNDLVGVGVTNTSQLGVGGATPDATNTFAFYGTDLLLNSGGSINMKYNKNAAGDDASMTFQSGFTTYGLFGLLGNNDVTLKVGTGFTTAMIADNTDGTVSFPEGVRHDTVTAYKTSSQTLTGTGTWDDIASWDGTHIAASGNLSWTASTGQAFVGKAGRFLVSYSLSTEISTGSSRSDSLAKLQKWNGSSWVDVEGTEHRMYNRVSGRGGSNASWSGVLDLTGSEGLKVVATVETGTDTIIVDQVSLSISRM
Physico‐chemical
properties
protein length:678 AA
molecular weight: 70386,91600 Da
isoelectric point:4,57153
aromaticity:0,08850
hydropathy:-0,17375

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dinoroseobacter phage vB_DshS-R5C
[NCBI] 		1965368 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600165.1 [NCBI]
Genbank nucleotide accession
NC_041921 [NCBI]
CDS location
range 16005 -> 18041
strand +
CDS
ATGGCGTTTCGTCGACTGGGTGACCTGATTGGTCGCTATATCGGAATTGGTGGCGCAACAGGTGACGCAACAAACCCGCTCTCTGTCCGAGGTGCGGGAGCGCTGTTCGACGGCGACTCGGGCGGTCACCAAGTTCGCATCAACAAGAGCGGCGTGAGCGACACGGCTTCCTTCCTGTTCCAGCGCGGCTTTTCAGGCCGCGCCGAGTTCGGCCTGATCGGCAACGACAATTTTGAGTTGAAAGTCTCGGCAGACGGCTCAGCGTTCAACCAGGCCTTCATCGTCGATGATGGGACGGCCGTTACCGACTTCAAGCAGCAGCCGACCTATCTGGGGGCGGCTCTCTACTCGACCAGCGACTTCACTCTTTCAGACGTCGCGCGACGTTCAGGAGGTAACACCTTCACCGGCGCGCAGACATTCCAGGGGTCCATGAATGTCACCGCTGCTGGCTCGTTCGAATCCGCCTTTACCACAACTGATGCCTCGTTGCACGATGTGGGACTCCGCATCGGCGGTGCGCGGACGGCCTCGTCGTCGTCAGATATTGCCTACGTCAAGCTGGCGAACACCACGGCTGAGAACTACGATCTGGCTCAGATCGTGGCTCAAGATCCCTCAGCGAACTCGACCCTCGAGAACGGGCGTCTGATTTTCCGAACGTCTGCGAGTGGGACGCTCACTGACGCCCTTCTTCTGAACAGCGACAACACGGCGGCATTCTACGGCGAGGTCACGATCAGCGGCGCCACCGTATGGCACGCTGACAACGACGGCGCAGGTTCTGGCCTCGACGCGGACCTGCTCGATGGCAACCAAGCGTCTGCGTTCGCGTTCCTCACGGGCGCGACGTTCACGGGTGGCGTTACCGCAACGACGTTCTCAGGGAACGGTTCGTCGCTCACCAATCTGAACGCGAGCAACCTCGCTTCTGGAACAGTCCCCGCCGCACGGTTGCCCGCTGTCACCAACACAGCAGATCAGCACGCCAATGCGACTGGCAACTGGCACACGTTCGTCAATGACGGTGGTGGAAACATCGGCATGCGTTGGAACGCGACCCCTGGAGGCACTAATACCCTGGTTGAAGGCAACGCAACTGCAGGCGGTCACGCTTGGATGCTTCGCATCGACAACGACAACGCACTCGGCGACTTGTTCTGGAGACGAGGCAGCACTGCAACAAGCCAAGCAGGCGAGACCATTACCTGGGACAATTGGCTCGTCTTCGATGGTGGCCTTGATCGTGCGGAGTGGTTTAAAGATCTTGACCTGAACAACAACGACCTGGTCGGCGTAGGCGTCACGAATACGTCCCAACTTGGCGTGGGCGGCGCGACGCCCGACGCGACCAACACCTTCGCTTTCTACGGCACGGACCTCCTGCTCAATTCGGGCGGGTCCATCAACATGAAGTACAACAAGAACGCCGCGGGCGACGACGCGTCCATGACGTTCCAAAGTGGGTTCACAACCTACGGGCTCTTCGGGCTGCTCGGCAACAACGACGTGACGCTGAAAGTAGGCACCGGGTTCACTACCGCGATGATCGCCGACAATACGGATGGGACCGTCTCGTTCCCCGAAGGCGTCCGGCACGACACGGTCACAGCCTACAAGACGTCGAGCCAGACCCTGACGGGCACCGGAACTTGGGACGACATTGCGTCCTGGGATGGGACTCACATTGCAGCCAGCGGCAACTTGTCCTGGACGGCTTCGACGGGTCAAGCGTTCGTCGGCAAAGCCGGTCGGTTCCTCGTGTCCTACTCGCTATCGACCGAGATCAGCACTGGCTCGTCTCGCTCGGATTCACTTGCGAAGCTCCAGAAGTGGAACGGGTCGTCGTGGGTTGACGTTGAAGGTACTGAGCACCGGATGTATAACCGGGTCTCGGGACGCGGCGGCTCGAACGCGTCTTGGTCGGGTGTGCTCGATCTGACGGGATCGGAAGGCCTCAAAGTCGTCGCAACCGTCGAGACCGGAACGGACACCATCATCGTCGACCAGGTGTCGCTGTCGATCTCGCGCATGTAA

Tertiary structure

PDB ID
d1b2ff2c0ac5136ed2e7de0edbd0e6296174bd2b78a5a63c7acd6ce453f55507
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel roseosiphophage isolated from the oligotrophic South China Sea Yang,Y., Cai,L. and Zhang,R. — — GenBank