Protein

View in Explore
Genbank accession
XRL22932.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFSYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQDGVFTVPSVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVLGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVSLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85997,30790 Da
isoelectric point:5,01481
aromaticity:0,08651
hydropathy:-0,24415

Domains

Domains [InterPro]
IPR058003
4–786
IPR058003
XRL22932.1
1 786
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnD_TUMS_K1
[NCBI] 		3410929 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRL22932.1 [NCBI]
Genbank nucleotide accession
PV231794 [NCBI]
CDS location
range 23628 -> 25988
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATTCAGAGCTTGCTGCAGGGTGTTTCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAACATGCTCAGCGACCCGGTTTCAGGTATCCGCCGTAGACCGCCGGGTGAGATTGTCTGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGGCTCCTAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACCGTTACCTCTGCGGGGGTAGACTACTCAGGGGACTACACCGCCCCAGCTGCTGGTAGCACAAGCGGTAACGCTGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGAGACTCTCTTGTAGCTAATGGCCTGCCAGCTGGGAACGTGAGCGTACGCGGCGCGTACCTGTTCTTCTACGGGTTGAGCAACTGCGTGGTATCATCTGACGCTGGCGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAAGCTGACGGAGCAATGTGCCGTGTAGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAGCTACAGTACCCGCACCTGGTCTGAGGTGGGGGCGTACGGCAGCATCACCAAGATTACGAACATGCCTAGAGAGCTCGCCGCAGATGACAACATCATTGCGCGCGATTGGGAGGGGCGCTTAGCTGGTAACGACGATAACAACAGTAATCCCGGATTCGTCGAGAATGGATACATCACTGGTATTGCAGCTTTCCAGGGGCGCCTGGTTCTGCTTAGCGGCAGCTCTGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCCACTGTGACGTCACTTCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGCACCGCTGTGCAGTTCAACCGGGACTTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACTCCAACTAACGCAAGTATTAGTATTACCAGCACCTACGATTGTGACAGCCGTGTTACCCCGGTAATGGCTGGGCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCAGGTATACTGGAGCTAATCCCATCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCGGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGATGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCAAGCAACAAGCTTTTGATTGTGTCTATGGACCCGCGTGAGGGTTATCAGCTGGGCTCAGAGTACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTGCAGGACGGGGTGTTCACTGTCCCGTCGGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCCTAACGTACTTGCCCAGCAACCCTATGGGGCCTACTGAGGTTGGTATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCTCGGCGTACCTGATGGCACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACACCTATTCTACGGGACCAGAATGACAAGCTCGTGGGGAGTGGGCACGTGCGCCTGCTGCGCCTGGATGTAGCGGTGCGTAACTCAGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTCAATTGGGGTGGAGAACTGACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAAGCTCTGCGTATGGACTTGGCTACGATTACCGTACCATGCCGCACCAACGCAGACACAACCGAGGTATCACTATTTACTGAGGGTTCTATGGAGCTGAACGTGCTGGATATCTCGTACATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Tertiary structure

PDB ID
69ce8643ef84981c55c16e1957a9765c32685c7c1fcc78dd5dd6a79fb8b05fa1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2407
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization, and genome analysis of a new Klebsiella phage vB_KpnD_TUMS_K1 Torkashvand,N., Kamyab,H., Sepehrizadeh,Z. and Shahverdi,A.R. 2023-04-25 — GenBank