Protein

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Genbank accession
CAB93927.2 [GenBank]
Protein name
gp21, tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence GenBank
Probability 1,00
Protein sequence
MAVEVTVDIKDIFGDTDNRDKVRAWSPGIREAGDGLINSRPQTKQLVNGKATLTLEPGPVTVQFLPIGAAGKTKFEGVVPDTGPVTLRSVIEGDFTYTPPVVGEAQKASREAVQAADRAKGIADKFGDVDTAIAQAKTSENNAKASETADKTSQTAAKTSETNAKTSETNAGASATAASTSATNAKTSETNAGASATAASTSATNAKTSQTAAKTSETNAKTSETNAGASATAAANSATSASNSAASIKTSETNAGASATAAANSATAAGLAADRAAVQPRVRPI
Physico‐chemical
properties
protein length:285 AA
molecular weight: 28408,63040 Da
isoelectric point:6,42709
aromaticity:0,02456
hydropathy:-0,40491

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage BFK20
[NCBI] 		28358 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host [Brevibacterium] flavum
[NCBI] 		92706 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Corynebacteriaceae > Corynebacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB93927.2 [NCBI]
Genbank nucleotide accession
AJ278322.4 [NCBI]
CDS location
range 18613 -> 19470
strand +
CDS
ATGGCCGTAGAAGTCACAGTAGACATTAAAGATATTTTCGGTGATACGGATAACCGGGACAAGGTGCGCGCGTGGTCTCCCGGTATTCGCGAGGCCGGGGACGGGCTTATCAATTCTCGCCCCCAAACTAAGCAACTGGTCAACGGTAAAGCTACGCTCACTCTTGAACCTGGCCCCGTGACCGTCCAGTTCTTGCCTATCGGTGCAGCGGGTAAAACAAAATTCGAGGGCGTTGTACCGGATACCGGCCCGGTAACGCTGCGCTCGGTTATCGAGGGCGATTTTACTTATACCCCGCCTGTGGTGGGCGAAGCTCAAAAAGCGTCCCGTGAGGCGGTACAAGCTGCGGATCGTGCTAAGGGTATCGCCGATAAATTCGGCGACGTAGATACCGCTATCGCTCAAGCCAAGACAAGCGAGAATAACGCTAAGGCGAGCGAGACGGCAGATAAGACCTCACAGACCGCAGCCAAGACAAGCGAGACTAACGCTAAGACCTCGGAGACTAACGCCGGGGCTAGTGCTACGGCTGCGTCTACGTCGGCGACTAACGCTAAGACCTCGGAGACTAACGCCGGGGCTAGTGCTACGGCTGCGTCTACGTCGGCGACTAACGCTAAGACCTCTCAGACTGCAGCCAAGACAAGTGAGACTAACGCCAAGACGAGTGAGACTAACGCCGGGGCTAGTGCTACGGCTGCAGCCAACTCAGCTACGTCAGCGTCCAACTCTGCAGCGAGTATCAAGACGAGCGAGACTAACGCCGGGGCTAGTGCCACGGCTGCAGCCAACTCAGCTACGGCAGCCGGTCTCGCTGCGGATCGTGCGGCAGTGCAACCACGGGTAAGGCCGATCTAG

Tertiary structure

PDB ID
cea9ad8f9c03b0a93bc780db0138e8858b6c5cd2b9aaabc81eb90a3040ac1dd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of bacteriophage BFK20 from Brevibacterium flavum Koptides,M., Barak,I., Sisova,M., Baloghova,E., Ugorcakova,J. and Timko,J. 1992 1512569 GenBank
Characterization and sequence analysis of the F2 promoter from corynephage BFK20 Koptides,M., Ugorcakova,J., Baloghova,E., Bukovska,G. and Timko,J. 1994 7879712 GenBank
Complete nucleotide sequence and genome analysis of bacteriophage BFK20--a lytic phage of the industrial producer Brevibacterium flavum Bukovska,G., Klucar,L., Vlcek,C., Adamovic,J., Turna,J. and Timko,J. 2006 16457869 GenBank
Transcriptional profiling of bacteriophage BFK20: coexpression interrogated by 'guilt-by-association' algorithm Majtan,T., Halgasova,N., Bukovska,G. and Timko,J. 2007 17052739 GenBank