Protein

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Genbank accession
CAB4217664.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTKVSYSMITGAVVNILDYGAIADYNENTPGSGTDNSAAIQAAVDAANAKSTNGAVYIPSGAYKILTAISVPYGVSIFGDGGTASVLHSEGCNGLNFTTFGYSIGSMFYEDFGLTAATGTNFAAVQSINSPTSVTQDGLNFNRVRFYGWNQCFVLSSTWNTTISTCRAENINNFVTLSQSNGQAVIVKIVNNNIVYAAGGRGTGNIYAINVLNTTGFTETVHIFQNSIYGFQICVNVDQATYITIGSNDLSASVKAIAFVTPAGGYNICNNYIEVSGSGTGIFGAAQGSETPETRTNIQNNYFIGTVTAAIGIQLNTAVATYQWNATVRDNTFFGFATNDILFYGSGKSLIDNNRCMSTGPTNSIFIGEVLGSPVILTNNYLRKALFIDVLADFTGGKLILLNNVESNSFQSTHQAAAPSTGTWRVGDIVYNNAPASAGYVGFVCTVAGTPGTWKSFGLIA
Physico‐chemical
properties
protein length:463 AA
molecular weight: 48729,76150 Da
isoelectric point:4,93234
aromaticity:0,11231
hydropathy:0,15875

Domains

Domains [InterPro]
IPR012334
11–383
IPR012334
IPR011050
13–367
IPR011050
IPR024535
16–93
IPR024535 IPR011050
CAB4217664.1
1 463
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4217664.1 [NCBI]
Genbank nucleotide accession
LR797458 [NCBI]
CDS location
range 40080 -> 41471
strand -
CDS
ATGGCGCTTACAAAAGTTTCCTATTCAATGATTACTGGCGCTGTTGTCAATATTTTGGATTACGGCGCAATAGCGGATTACAACGAAAACACACCCGGTTCTGGAACTGATAATTCAGCAGCTATTCAAGCTGCTGTTGATGCTGCCAATGCGAAATCAACAAACGGTGCTGTGTACATTCCATCTGGCGCATACAAAATTTTGACCGCAATTAGTGTCCCGTATGGGGTTTCAATTTTTGGTGACGGTGGAACAGCATCTGTTTTGCACTCTGAAGGTTGTAATGGACTTAACTTTACGACCTTTGGCTATTCCATTGGAAGTATGTTCTATGAGGATTTTGGGTTAACTGCCGCAACAGGAACAAATTTTGCCGCCGTTCAATCTATAAACAGTCCAACATCAGTAACCCAAGATGGTTTAAATTTTAACCGAGTGCGGTTTTATGGATGGAATCAATGTTTTGTATTATCTAGCACATGGAACACAACTATTTCCACTTGCAGGGCCGAAAACATTAACAACTTTGTTACATTATCGCAAAGTAATGGACAAGCAGTTATAGTCAAAATTGTAAATAACAATATTGTTTATGCCGCTGGCGGTAGGGGTACAGGCAATATATACGCTATTAATGTTTTAAACACAACTGGATTTACTGAAACCGTCCACATTTTTCAAAACTCAATATACGGCTTTCAAATATGTGTCAATGTAGATCAAGCTACATACATCACCATAGGAAGCAATGATCTTTCAGCTTCAGTAAAAGCCATTGCTTTTGTTACGCCTGCTGGTGGATATAACATTTGCAACAACTACATTGAGGTTTCTGGTTCAGGCACAGGAATTTTTGGTGCCGCGCAAGGTTCTGAAACGCCGGAAACCAGAACAAACATTCAAAACAATTATTTTATTGGAACAGTTACTGCGGCTATTGGAATTCAATTAAATACTGCTGTTGCAACGTATCAATGGAATGCTACGGTACGAGACAACACATTTTTTGGGTTTGCAACAAATGATATTTTGTTTTATGGCTCGGGTAAATCTCTTATTGACAACAACCGTTGTATGTCTACGGGGCCTACTAACAGTATTTTTATCGGGGAAGTGCTTGGCTCACCAGTCATCCTGACAAACAACTATCTTCGTAAAGCGTTGTTTATTGACGTACTTGCAGATTTTACGGGCGGCAAATTAATTTTGCTAAACAACGTAGAGAGTAATAGTTTCCAATCTACCCATCAAGCTGCTGCACCTTCAACTGGAACATGGCGTGTTGGGGATATTGTGTATAACAACGCTCCTGCGTCTGCGGGTTACGTCGGGTTTGTTTGCACAGTAGCCGGAACTCCAGGCACTTGGAAATCGTTTGGGTTGATTGCTTAA

Tertiary structure

PDB ID
974f0d8f51383d186dade3ed52e9bb14b3a587ca08a717937e4fe9e9c69f5745
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8508
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50