Protein

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Genbank accession
YP_007674333.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLVSGITESLSNTKSETEIGIGGYRLFARVRETINYRNIVPTDTLEDGSNSTDDIINEPITISIEGVVSDLFVEDKQYPQLISKDFSSVGEVTALLPAKSQQQIQRISQIDSQIRDAVLAAERAERLAGKPYEFFGNSGNSAKTEQEKFIDFMEALYFSRQPTEVSVNFRDYKNMALVSFIPVRDNNTKDTRFTADFQQINYSTLVYTPVSSPSKSVAGKVSDASSKGGQNPESNETGERSLLSSLIGG
Physico‐chemical
properties
protein length:250 AA
molecular weight: 27524,19550 Da
isoelectric point:4,74267
aromaticity:0,08000
hydropathy:-0,42760

Domains

Domains [InterPro]
IPR048494
31–211
IPR048494
YP_007674333.1
1 250
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VBM1
[NCBI] 		754074 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus RIMD 2210633
[NCBI] 		223926 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007674333.1 [NCBI]
Genbank nucleotide accession
NC_020850.1 [NCBI]
CDS location
range 15843 -> 16595
strand -
CDS
GTGAGTCTAGTTAGCGGAATTACGGAATCTTTAAGTAACACAAAATCTGAGACTGAGATCGGGATTGGCGGATATCGACTTTTTGCAAGAGTAAGAGAAACGATTAATTATAGAAATATCGTTCCTACAGATACACTTGAAGACGGCTCAAACTCAACGGATGATATCATTAATGAGCCGATAACGATCTCTATCGAGGGCGTTGTTAGCGATCTGTTTGTGGAAGATAAGCAGTATCCTCAATTGATCAGCAAGGATTTTTCATCCGTTGGTGAGGTAACCGCACTACTGCCAGCAAAAAGCCAGCAACAGATACAAAGAATTAGTCAAATTGACTCGCAAATAAGAGATGCAGTTTTAGCGGCGGAACGGGCAGAAAGACTTGCCGGTAAGCCGTATGAATTTTTTGGCAATTCAGGAAATTCAGCAAAAACCGAACAGGAGAAATTTATTGATTTCATGGAGGCTTTGTATTTTTCAAGACAGCCGACGGAAGTTTCAGTAAATTTCAGAGACTATAAAAATATGGCTCTGGTTAGCTTTATTCCAGTTCGTGATAACAACACCAAAGACACGAGATTTACCGCTGACTTTCAGCAAATAAATTACTCAACTTTGGTTTACACTCCGGTATCAAGTCCATCAAAATCCGTCGCCGGAAAAGTTTCGGATGCATCAAGCAAGGGCGGACAGAATCCAGAGTCAAACGAAACTGGCGAGAGATCATTACTTAGCAGCTTGATAGGTGGGTAA

Tertiary structure

PDB ID
919d13471a06526b83174b4d4c7df1bfda5ba86b8ad34b6f8e82e2550ba5ad0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50