Protein

View in Explore
Genbank accession
QXV75776.1 [GenBank]
Protein name
lateral tail fiber proximal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSGHTPFNTIPNEGYCCETLNDPIVDKMIGNAYYVVKFVALRMTFIKNVSDNMTQLLAIHNKLTELSAIYTKLDELQLIHNNLDKLQELYNQLSKLTGLYDNLQALLRVYDNLTPINTVASNIDAVNTVATDIAKVIIVSAQIDKVITVANSITNVNTVAGSIDAVNTVSTNINTIKNVNTNMAALLDLDNHMTELLAVHARLGDLVTIAEQLDTIIADHEKYATAEGAGLIGFNQAQTYAANTVGAMLRQVITMGNDKGGYAVAGKLTSTGGVWSLATGSINMNAPTAGAVANLVLNYKAGKVSGLLVAPSQQMALDGLIMGASTTDNTATVSVTAPLRFKADLTAKAISGVNTRIMPSSAVTLNVDAYGGITLGYPPSLQTVEPVMTFITPTGKAPLTPRFSSVTAGAAVLVMVGEAEAQLKYSGGGWAAVSDWDSGTYCAFDTVSGELTVYHSTLIKDSTVTFSLLLPTDGTQLTAQLKSHTDSSFVLKIAKPDGSLLDAPLEGMGIMYSRGMHGIYKVPYGSLIVDVGRVQVKFSEFNTTEGISVVGINSNA
Physico‐chemical
properties
protein length:556 AA
molecular weight: 58820,52440 Da
isoelectric point:5,21068
aromaticity:0,06115
hydropathy:0,18777

Domains

Domains [InterPro]
IPR001611
72–93
IPR001611
Coil
76–106
Coil
QXV75776.1
1 556
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AlfredRasser
[NCBI] 		2852040 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV75776.1 [NCBI]
Genbank nucleotide accession
MZ501049 [NCBI]
CDS location
range 2992 -> 4662
strand +
CDS
ATGAGCGGTCATACCCCGTTTAATACTATCCCCAATGAAGGTTATTGCTGCGAAACACTTAATGACCCAATCGTTGATAAGATGATTGGTAATGCTTACTACGTTGTTAAGTTCGTAGCATTACGAATGACCTTTATTAAAAATGTCAGTGATAATATGACTCAGCTACTTGCTATCCATAACAAGTTAACTGAGCTATCTGCTATCTACACTAAGCTAGATGAACTACAACTTATTCATAATAATCTGGATAAGTTACAGGAACTCTACAATCAATTATCTAAACTGACTGGTCTATATGACAATCTTCAGGCATTGCTGAGGGTCTATGACAACCTGACTCCAATCAATACTGTAGCTTCTAACATTGACGCAGTTAATACAGTAGCAACTGATATTGCTAAAGTAATTATTGTTTCTGCTCAAATTGATAAAGTAATTACTGTTGCTAATAGCATTACCAACGTGAATACCGTTGCTGGTTCCATTGACGCAGTTAATACAGTAAGCACCAATATCAATACGATTAAGAATGTGAATACCAATATGGCAGCACTGCTTGATTTGGATAATCACATGACTGAACTACTGGCTGTACATGCCAGATTAGGTGACTTAGTTACCATTGCAGAACAGCTTGATACAATCATTGCTGACCATGAAAAGTATGCTACTGCTGAAGGCGCAGGTCTGATTGGCTTTAATCAGGCACAGACTTATGCAGCTAATACAGTAGGTGCAATGCTCCGTCAGGTTATTACTATGGGTAATGACAAAGGTGGTTATGCTGTAGCAGGTAAACTGACCTCTACTGGCGGAGTATGGTCGTTAGCTACTGGTTCCATCAACATGAATGCCCCTACTGCTGGTGCAGTAGCTAACCTGGTTCTTAATTATAAAGCCGGTAAAGTTAGTGGTTTGTTGGTAGCACCTAGTCAACAAATGGCATTGGATGGCCTGATTATGGGTGCATCTACTACTGACAATACAGCTACTGTATCTGTTACTGCCCCACTCCGTTTTAAAGCAGACCTAACTGCTAAAGCAATCTCCGGTGTGAATACTCGTATCATGCCTTCCAGTGCAGTGACTCTGAATGTAGATGCATATGGTGGTATTACTCTTGGGTATCCACCTAGTCTTCAGACTGTAGAACCAGTGATGACTTTCATTACCCCTACAGGCAAGGCTCCACTGACCCCACGATTCTCCAGTGTTACGGCAGGGGCTGCTGTACTGGTTATGGTTGGGGAAGCAGAAGCACAATTGAAATATTCAGGTGGTGGTTGGGCTGCTGTATCTGATTGGGATTCGGGTACTTATTGTGCATTCGATACAGTATCTGGTGAGTTAACGGTATATCACAGTACTCTTATCAAAGATTCTACTGTTACATTTAGCTTACTGTTACCTACCGATGGTACTCAGCTTACGGCACAACTGAAGAGTCATACTGATAGTTCCTTCGTATTGAAGATTGCTAAACCAGATGGTTCTTTACTTGATGCCCCATTGGAAGGTATGGGTATCATGTACTCTCGTGGTATGCACGGAATCTATAAAGTACCTTATGGTTCTCTAATCGTAGATGTCGGTCGTGTTCAGGTTAAATTCAGTGAATTTAACACCACGGAAGGTATTTCCGTTGTTGGTATTAACTCCAACGCTTAA

Tertiary structure

PDB ID
0429f2df821bb9d747b38daed986b8382a088e7301f1f0e9a72c7ff46d116db3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5220
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank