Protein

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Genbank accession
AVO24286.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MADLPEQPAGWPGIPMISTSDPVLGGQDGPANRQAAALISRLQTVRDLVDAATAALATVTPQVDQHVQTINALQASVSSVQTSVQTVSGVATAAQTAASVADAKAVAAQTAATAKAVRIDLGTVTVTYTASTALVAGARSIAVACTGAQVGDAIFVAATNAIPDGYAVGAAQCLVADTIRVSVIYPALSIGNSFSIALRVFALR
Physico‐chemical
properties
protein length:204 AA
molecular weight: 20341,86980 Da
isoelectric point:5,09274
aromaticity:0,03431
hydropathy:0,51078

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XPV2
[NCBI] 		2099861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVO24286.1 [NCBI]
Genbank nucleotide accession
MG944235 [NCBI]
CDS location
range 30182 -> 30796
strand -
CDS
ATGGCCGATCTGCCCGAACAACCTGCCGGCTGGCCCGGTATCCCAATGATATCGACGTCCGACCCGGTCCTAGGCGGTCAAGACGGACCCGCCAATCGACAAGCTGCGGCGCTGATCTCGCGCTTGCAGACGGTACGCGATCTCGTAGACGCAGCTACCGCGGCGCTCGCAACGGTGACCCCGCAGGTCGACCAGCACGTCCAGACGATCAACGCGCTGCAAGCCTCTGTCAGCTCCGTACAGACGTCCGTACAGACGGTCAGTGGGGTTGCCACGGCGGCTCAGACCGCGGCCTCTGTGGCCGACGCTAAGGCCGTTGCCGCGCAAACGGCCGCCACGGCCAAGGCGGTACGCATCGACCTGGGGACTGTCACGGTCACTTACACGGCAAGCACCGCACTAGTGGCAGGCGCGCGGTCGATTGCCGTGGCGTGCACCGGGGCCCAGGTCGGCGACGCGATCTTCGTGGCCGCGACCAACGCGATACCGGACGGCTACGCGGTCGGCGCGGCGCAATGTCTGGTCGCCGACACGATCCGCGTATCGGTGATCTACCCTGCGCTGAGCATCGGCAATAGCTTCAGCATCGCGCTACGCGTGTTTGCGCTGCGGTAA

Tertiary structure

PDB ID
8ea4d16010694717a36adb42ed5bfe1d32a2a4069ea84c7ea495046c163033ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and comparative genomics of Xanthomonas oryzae pv. oryzae bacteriophages Varga,I., Molnar,J., Gazdag,A., Szucs,D., Doffkay,Z., Valappil,S.K., Papp,S., Pinter,R., Vera Cruz,C.M., Ricardo,O., Vizi,T., Schneider,G., Rakhely,G. and Kovacs,T. 2019-07-03 — GenBank