Protein

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Genbank accession
YP_009814993.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSRNLMPKSGAMAPYIVVNRDAAVAGVFSVDGESGAVVLTSKYLQISKYTTDKAATDSAIKSINESIGNINTALGGINTSIETKAAKGANNDITELNALTKAITIAQGGTGATDVAGSRKNLGLTAFEMTAVDTRMFSPDRKKILRISDAMWGAYNLETGQEIALGIGSGGTGALNPKDARKNLNIPVGANAEIIPANSNVLDYIAIAGQSGYYSSGDLVTHIPPVKEGWWTYNFHCHGVDINGAAQYGVLKAVGLSGSSWINVLDGTGNWKGWQEQFNLQSTVLVTNGGTGANTAAGAITKLGIPNIAEWTPANGVVRWTVNTPSEPTSTGTILKGGLLESSHNIAGVQRVITSLVPEYKWGESDTVTNLNVALSDAQGHIIRYGGYKFSSSGVASFGTLRALSFDGIILDRGGDPTFSNRIVLETVKGAEGATLAGSMANFVDGTSRVVVNALSVSNNRKTVLYPSGGVICKPGLLGDPQLYSYSIDYSGGAAQLWIDSSNFGNIQTAPVSDKLLKKDITYRTDNEVALKQVMQWKIADFRYKKRGMLPESEMKTGWIANDLVTISPECVKGVGLTKGFDENNPKGAYELDTVAIMAKMSQAIQAQQKEIEELKELVNQLLTK
Physico‐chemical
properties
protein length:625 AA
molecular weight: 66269,16190 Da
isoelectric point:6,57448
aromaticity:0,07040
hydropathy:-0,12608

Domains

Domains [InterPro]
IPR030392
513–619
IPR030392
IPR030392
513–573
IPR030392 Coil
YP_009814993.1
1 625
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STG2
[NCBI] 		2480623 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814993.1 [NCBI]
Genbank nucleotide accession
NC_048089.1 [NCBI]
CDS location
range 23663 -> 25540
strand +
CDS
ATGTCACGTAATTTAATGCCTAAATCTGGCGCAATGGCGCCATATATTGTTGTTAACAGGGATGCTGCTGTTGCGGGTGTCTTCTCTGTTGATGGAGAATCTGGTGCTGTTGTTCTAACTTCTAAATACTTACAAATCTCTAAGTATACTACAGATAAAGCGGCTACAGATTCTGCAATTAAAAGTATCAATGAGTCTATTGGTAATATTAATACTGCTCTTGGTGGTATTAATACATCTATAGAAACTAAAGCGGCGAAAGGTGCTAATAATGATATTACAGAACTAAATGCACTTACCAAAGCTATTACTATTGCTCAAGGTGGTACTGGTGCTACTGATGTGGCGGGAAGTAGAAAGAATCTAGGTCTTACCGCTTTTGAAATGACTGCTGTAGATACTAGAATGTTTAGTCCAGATAGGAAAAAGATACTTAGAATATCTGATGCCATGTGGGGGGCCTATAATCTTGAAACAGGCCAAGAAATTGCACTAGGGATTGGTAGTGGAGGCACTGGTGCTTTAAATCCTAAGGACGCAAGAAAAAATCTAAATATCCCTGTTGGGGCTAATGCTGAGATAATTCCGGCAAATAGTAATGTCTTAGACTATATTGCTATTGCAGGTCAAAGTGGATACTACTCTTCCGGGGATTTAGTTACACATATACCCCCAGTTAAAGAAGGTTGGTGGACGTATAATTTCCATTGTCATGGAGTAGATATTAACGGTGCTGCACAGTATGGTGTTTTAAAGGCTGTTGGATTATCAGGTAGTTCATGGATTAACGTTCTAGATGGTACGGGTAACTGGAAAGGTTGGCAAGAACAGTTTAATCTGCAATCAACTGTCCTAGTAACTAATGGTGGTACTGGAGCAAATACGGCTGCAGGTGCTATAACTAAATTAGGAATTCCTAATATTGCAGAATGGACTCCTGCTAATGGGGTAGTACGTTGGACAGTTAATACTCCTTCTGAGCCTACAAGTACAGGCACAATATTAAAAGGGGGATTACTAGAAAGCTCTCATAATATTGCAGGGGTACAACGTGTTATTACTAGTTTAGTTCCTGAGTATAAGTGGGGCGAATCTGATACAGTTACTAATCTTAATGTGGCTCTATCTGACGCACAAGGACATATTATTCGCTATGGTGGATATAAATTCTCCTCCAGTGGGGTAGCTTCTTTTGGTACTTTAAGAGCGTTATCTTTTGATGGTATTATACTAGATAGGGGCGGAGATCCTACTTTCTCAAATAGAATAGTTCTTGAGACAGTAAAAGGAGCTGAAGGTGCTACATTAGCGGGGAGTATGGCTAACTTCGTAGATGGAACATCACGAGTAGTAGTTAACGCTTTGAGTGTCTCTAATAATAGAAAAACTGTTTTATACCCCAGCGGTGGTGTTATATGTAAGCCTGGACTTTTAGGAGATCCACAACTTTATAGTTATAGTATTGACTATTCTGGAGGAGCTGCACAGCTGTGGATTGATAGCTCTAACTTTGGTAATATACAAACAGCACCAGTATCTGATAAGTTACTAAAGAAAGACATAACTTATCGTACGGATAATGAGGTTGCCCTTAAACAAGTAATGCAGTGGAAGATAGCTGACTTTAGGTACAAGAAGAGAGGTATGCTACCTGAGTCGGAGATGAAAACTGGTTGGATTGCAAACGATCTTGTAACTATAAGTCCAGAGTGTGTCAAAGGTGTAGGATTAACCAAAGGTTTTGATGAAAATAACCCTAAAGGAGCTTATGAACTAGATACGGTTGCAATAATGGCTAAGATGTCTCAGGCTATTCAGGCACAGCAAAAAGAGATAGAAGAGTTGAAAGAACTTGTCAATCAACTACTCACTAAGTAA

Tertiary structure

PDB ID
1c5f25383fd5b9b42d0a321455e29cc7f9f975bdbf5f1ecc0a29caa8d85fa633
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7064
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage control of Salmonella Duc,H.M. 2021-06-07 — GenBank