Protein

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Genbank accession
AGN11945.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
LGSSSLKWQNIHADAASIATVTGNVIGNLTGNLIAATTEAKDIKPESNSTYDLGSSSLKWQRVFADAATISTTTGNLTGNVTGNLVASTTESANIIPDTNGIYSLGSSTKKYMNVFADAAAITTITGNLTGTATQAANLNNHNTDALSEGTSNLYTTAARTRGHFTYGTGIEHDGAGGLAVTQSDINTDNLTEGSTNVFFTDTRADARVAAATGANLDLSQKTTTNLAEGTNLYHTEARVQTKLDHAFEQLKAMLNNLATSTTLKLNLSGDPTPGSVVTLGSISSNGVGGYTAGTNVATTASALGSGLTVDTTVNADGAITAIALNQAGTDYVIGETITIPNSNLGGVATLNLGTLSGGVGGFSAGTGVATTNSGAGDDALTVNTTVDGNGAITNVVINAAGTGYVAGDTITITNPNAGGAATVDTLVGGTGYANGTAIATTTVGSGSGLTLDLTTSNGVVTGVAINGAGSGYAVDDTITIVNANASGVKTLGSIATAGTGYATGTAIATTNDGSGSNFTVDISSVDASGAITAVAINNDGSGYTASDTITIVNANASGVKTLGTIATGGTGYAAGSAIATTSSGSGTSLTVDLTVDNGVVTGVTINDDGSGYAASEVITIVNANASGIKTVGNFGATDSSRTPGTYTIGTSDYITQASGANATFTVVIGVGGTVDSITVTDDGSGFIVNETITIADAQLGGGGGAALTFDATAIHGNGCTIPVSAIHGNGCTIPVSEIHGNGATIDIATIFTNATVNVATVFTNATFSLSDITTMEIGATLTGTTSNSSGVITAMDSTSVTVDNVSGFFKKGETVGANDVTNLTISSFG
Physico‐chemical
properties
protein length:830 AA
molecular weight: 81389,71860 Da
isoelectric point:4,14620
aromaticity:0,04458
hydropathy:0,13819

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM3
[NCBI] 		536453 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN11945.1 [NCBI]
Genbank nucleotide accession
HQ337021 [NCBI]
CDS location
range 1 -> 2493
strand +
CDS
CTAGGTTCTAGTTCTCTTAAGTGGCAAAATATTCACGCGGATGCTGCTTCTATTGCTACTGTTACTGGTAATGTAATAGGTAATCTTACTGGTAATCTTATAGCAGCAACAACTGAAGCTAAAGATATTAAACCTGAGTCAAATTCAACATACGATCTAGGTTCTAGTTCTCTTAAGTGGCAAAGAGTTTTTGCTGATGCTGCTACTATTAGTACTACCACAGGTAATTTAACTGGTAATGTCACAGGTAATCTTGTAGCATCTACAACTGAATCAGCTAATATAATTCCTGATACAAATGGAATATACAGTCTAGGTTCTAGTACTAAGAAGTACATGAACGTTTTTGCTGACGCTGCTGCCATCACTACTATTACAGGTAATTTAACTGGAACTGCAACTCAAGCAGCGAATCTTAATAATCATAATACTGATGCTTTATCTGAAGGAACATCAAATCTATACACTACTGCTGCAAGAACCAGAGGACACTTTACATATGGTACAGGTATTGAGCACGATGGTGCAGGTGGACTTGCTGTAACTCAGTCAGATATCAATACTGATAATCTAACTGAAGGATCTACAAACGTATTCTTTACAGATACTAGAGCAGATGCAAGAGTTGCTGCTGCGACTGGTGCAAACTTAGATCTAAGTCAGAAGACTACTACAAACCTTGCAGAAGGAACTAATCTATATCATACAGAAGCAAGAGTACAAACAAAACTTGATCATGCGTTTGAGCAACTCAAAGCAATGTTGAATAATCTTGCAACTTCTACTACATTAAAACTAAATCTATCTGGTGATCCTACACCTGGTTCAGTTGTCACTCTTGGATCAATATCATCAAATGGTGTTGGTGGATACACAGCTGGCACAAACGTTGCAACAACAGCATCTGCATTAGGAAGTGGATTGACAGTTGATACTACAGTAAATGCTGATGGTGCTATTACAGCAATTGCATTAAATCAAGCAGGAACTGATTATGTGATAGGAGAAACAATAACAATTCCTAACTCTAATCTTGGTGGTGTTGCTACTCTTAACTTGGGTACATTATCTGGTGGTGTTGGTGGATTTTCAGCAGGAACTGGTGTTGCTACAACAAACTCTGGAGCTGGTGATGATGCCCTAACAGTGAATACTACAGTCGATGGAAACGGAGCAATAACAAACGTTGTTATTAATGCTGCAGGAACAGGATATGTTGCAGGTGATACAATCACAATTACGAACCCTAACGCAGGTGGTGCAGCAACAGTTGACACACTTGTAGGTGGTACAGGATATGCAAACGGAACTGCCATTGCTACAACAACTGTTGGTTCTGGATCTGGTTTAACACTTGACTTAACAACTTCAAACGGAGTTGTCACAGGTGTAGCAATAAATGGTGCAGGATCTGGATACGCAGTTGATGATACTATTACAATCGTAAATGCTAATGCATCTGGTGTTAAGACACTTGGATCTATCGCTACTGCAGGAACAGGATACGCAACTGGAACTGCAATCGCAACAACCAATGATGGATCTGGTTCAAACTTTACTGTTGATATATCATCTGTAGATGCCTCTGGTGCGATTACAGCAGTAGCAATTAATAATGATGGATCTGGATATACTGCTTCAGATACTATTACAATCGTAAATGCTAACGCAAGTGGCGTTAAGACTCTAGGAACTATTGCCACAGGAGGAACAGGATATGCAGCAGGATCTGCAATTGCTACCACATCATCTGGATCTGGTACTTCATTAACTGTAGACTTAACTGTAGATAATGGAGTTGTGACAGGAGTTACAATTAATGACGATGGATCTGGATATGCAGCATCCGAAGTTATAACTATTGTTAACGCTAATGCATCTGGTATTAAAACTGTAGGAAACTTTGGTGCAACTGATTCATCAAGAACACCTGGCACTTATACTATAGGAACATCTGATTATATTACTCAGGCATCAGGTGCTAATGCAACATTCACCGTTGTGATTGGAGTCGGTGGTACTGTTGATTCCATCACTGTCACAGATGATGGATCTGGTTTCATTGTTAATGAGACAATCACAATTGCTGATGCTCAACTTGGTGGTGGCGGTGGTGCTGCTCTTACATTCGATGCAACAGCAATTCATGGTAATGGATGCACAATCCCAGTATCTGCCATACACGGAAATGGATGTACAATCCCAGTATCAGAGATTCACGGAAATGGAGCTACAATTGACATTGCTACAATCTTTACTAACGCAACTGTTAACGTTGCAACTGTATTCACTAATGCTACCTTCAGTCTATCCGACATCACAACTATGGAGATTGGAGCAACACTGACTGGAACAACTTCCAACAGTTCGGGAGTTATTACAGCCATGGATTCCACATCTGTCACAGTTGATAATGTATCTGGATTCTTCAAGAAAGGAGAAACAGTTGGTGCTAATGATGTAACTAACTTAACTATCAGTTCATTCGGTTAA

Tertiary structure

PDB ID
4a5c19c2b3b2a0e1d83b735f997eb826121bd3e1da4725f72e8a3e5744741ce7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank