Protein

View in Explore
Genbank accession
WYV99705.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MVDIVKQDMTYLWAIGGDVVAPDNAKIQEGWAVEVVPRQWWNWMQYRTDSNIAYMLQKGLPEWDGTTEYLANKSFVTVGGVVYKCIVTNTNKNPTTNPANWVRAFSDYSVAVTALGTLTPAADRMPYFTGANTAALTTITSFARTLLDDTSATTARTTLGAQASSTNLTALSGVTAATNALPYFNGTTTMATTTLSAFGRSLIDDADAAAARETLELGSAATYNVNGTSYGNTAVGGLGTTVLRNGSFGLGSIDLQDQPAGTNWNTINATGFYQMSTAGGDNSPGLSGQMMVMTNATNYITQLFSPQDTTGRLMVRSSSAGVFGSWNTVWTTGNLVKTTSETDTTAGAMLKVGDFGLGNTGPVATTALDTINAGGFYRASSTATGLPTANSTSIIQSQFNTGGALQIAGALTSGGGLYWRQQSGGSWGIWYQAAKTEYVDSQVSTLNSAINLKANIASPSFTGTPTAPTPTANDNSSKIATTAFVQSSRRNYSGSVLSVTTNTTFTISNSGYLYQAGADNLTVTIPVAGTVPVGTTYSFRNNRSSNFTISVPTGSIIADGSSTPSTLILAGGEWVEITNNNTSWYVAARGTLSEGSTAAEVALKAPLASPAFTGTPTVPTAATATSNTQAASTAFVKAALAAGNALSATTAARWTTGRTITLTGDVTGSVSIDGSANVSLAATLNSASLTNFYTKAQSDGRYVVNGATGSNLYVNVTNNSIPTISAATASFGSNSLRVSNGGNGNASAVLSFVREGTYATWFGLDTDNELAFGGWSDGAIRYRLWTEKNFVVGNHIALQGTGGIGTYALMVVGGGGGINPGDLAAGGNLRYSSTAASVSGAVPVGTWRLMGFVTNSDGSSSDSVTLCLRIS
Physico‐chemical
properties
protein length:871 AA
molecular weight: 89774,18160 Da
isoelectric point:5,23353
aromaticity:0,08611
hydropathy:-0,02675

Domains

Domains [InterPro]
cd19958
259–330
cd19958 cd19958
WYV99705.1
1 871
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Roomu-2
[NCBI] 		3132621 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYV99705.1 [NCBI]
Genbank nucleotide accession
PP496417.1 [NCBI]
CDS location
range 18428 -> 21043
strand +
CDS
ATGGTCGATATCGTAAAACAGGATATGACATACCTTTGGGCAATTGGTGGTGACGTAGTTGCACCTGACAATGCCAAGATTCAAGAGGGTTGGGCTGTAGAAGTTGTGCCGCGTCAGTGGTGGAACTGGATGCAATACCGCACAGACAGCAACATCGCCTATATGCTGCAAAAAGGGCTACCAGAGTGGGACGGTACAACCGAGTATCTCGCTAACAAATCTTTTGTAACTGTCGGTGGAGTTGTTTACAAGTGCATTGTCACCAACACAAACAAAAACCCAACAACAAACCCAGCAAACTGGGTTAGGGCGTTCAGCGATTACAGCGTTGCTGTTACTGCACTCGGGACACTTACACCAGCAGCTGACCGTATGCCTTATTTCACAGGTGCAAATACCGCTGCTCTGACAACCATCACAAGCTTTGCACGTACACTGCTAGATGACACCTCTGCAACAACAGCAAGAACAACACTCGGCGCTCAAGCTTCAAGCACAAACCTTACTGCATTGTCTGGTGTAACAGCTGCAACAAACGCACTGCCATACTTCAACGGGACAACTACAATGGCAACAACAACGTTGTCTGCGTTTGGTCGTTCTCTGATTGATGATGCAGACGCTGCTGCTGCTCGTGAAACACTTGAACTAGGGTCAGCTGCAACTTACAACGTAAACGGCACTTCATACGGAAACACGGCTGTTGGTGGTCTTGGGACTACAGTTCTGCGTAACGGATCTTTTGGACTTGGTTCCATTGACCTACAAGACCAACCAGCAGGAACAAACTGGAACACAATTAATGCCACTGGGTTCTACCAGATGTCAACAGCGGGCGGAGATAACAGCCCCGGCTTGTCTGGCCAGATGATGGTAATGACCAATGCCACAAACTATATCACTCAGCTGTTTAGCCCGCAAGACACTACTGGCCGTTTGATGGTCAGATCTTCGTCTGCTGGTGTATTCGGGAGTTGGAATACTGTCTGGACAACTGGCAACTTGGTCAAGACAACAAGCGAAACAGACACAACTGCAGGGGCTATGCTGAAAGTCGGTGACTTTGGTCTTGGTAACACTGGCCCTGTAGCAACTACAGCCCTAGACACCATTAACGCTGGTGGGTTCTACAGGGCTTCAAGTACTGCAACTGGGCTACCCACTGCAAACTCTACTTCAATTATTCAAAGCCAGTTCAATACTGGTGGAGCATTGCAGATTGCAGGTGCACTGACCTCTGGTGGAGGTTTGTACTGGAGGCAACAATCTGGAGGATCTTGGGGTATTTGGTATCAAGCTGCCAAGACTGAGTATGTAGACTCTCAAGTGAGTACACTTAACTCTGCAATCAACCTCAAGGCCAATATTGCAAGCCCCTCATTCACTGGCACTCCAACAGCGCCAACTCCAACAGCTAACGACAACAGCTCTAAGATAGCCACAACTGCGTTTGTTCAGTCTTCTAGAAGAAACTACAGTGGATCTGTGCTGAGCGTTACAACCAACACAACGTTTACAATCAGTAACTCTGGATACCTGTATCAAGCTGGTGCTGATAACTTGACTGTTACAATCCCAGTAGCGGGCACTGTGCCAGTAGGTACAACTTACAGTTTCAGAAACAATAGAAGCTCAAACTTCACAATTTCTGTCCCAACTGGCAGCATCATCGCAGATGGATCTTCAACTCCTTCAACTCTAATTCTCGCTGGTGGTGAATGGGTTGAGATCACGAACAACAACACAAGCTGGTATGTCGCAGCAAGGGGTACTCTGTCCGAAGGTTCAACGGCTGCGGAAGTTGCTTTGAAGGCTCCTTTGGCTTCACCTGCTTTTACAGGCACGCCAACAGTACCAACTGCAGCCACAGCCACAAGCAACACTCAGGCCGCCTCTACAGCGTTCGTTAAGGCTGCCCTTGCAGCTGGTAACGCCCTAAGTGCCACCACAGCTGCTCGATGGACAACAGGCCGTACAATCACCCTGACAGGTGACGTAACAGGTAGCGTGTCGATTGACGGTAGTGCAAACGTAAGCTTGGCAGCAACACTTAACTCGGCCAGTTTGACAAACTTCTACACGAAGGCTCAATCTGACGGAAGATACGTTGTTAACGGTGCAACTGGTTCAAACCTGTATGTGAACGTCACTAACAACTCGATCCCGACAATCTCTGCTGCCACTGCCTCTTTCGGAAGCAACAGCTTGAGAGTATCTAACGGGGGTAACGGTAACGCTTCTGCTGTTCTTTCATTTGTTCGTGAAGGTACATACGCAACATGGTTTGGTCTTGATACTGACAACGAGCTGGCCTTCGGTGGTTGGTCCGATGGGGCTATCAGATACCGTCTGTGGACAGAGAAAAACTTCGTAGTTGGTAACCACATTGCTCTACAAGGTACTGGTGGAATCGGTACATACGCACTTATGGTAGTTGGCGGTGGCGGTGGTATCAACCCCGGTGATCTAGCTGCTGGCGGTAACTTGAGATACTCTTCTACAGCTGCAAGTGTTTCTGGTGCAGTTCCAGTTGGTACTTGGAGACTTATGGGCTTCGTAACTAACTCAGACGGGTCTAGCTCAGACTCCGTTACACTGTGCTTGAGAATCTCTTAA

Tertiary structure

PDB ID
4d9b3f5fd457c22ef585ef9958c99f0bc0d937e28527b2b5fa63718a93524a43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6823
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank