Protein

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Genbank accession
QRI46366.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MADLPEQPAGWPGIPMISTSDPVLGGQDGPANRQAAALISRLQTVRNLVDAATAALATVTPQVDQHVQTLNALQASVSSVQTSVQTVSGVATAAQTAASVADAKAVAAQTAATARAVRIDLGTVTVTYTASTALVAGARSIAVACTGAQVGDAIFVAATNAIPDGYAVGAAQCLVADTIRVSVIYPALSIGNSFSISLRVFALR
Physico‐chemical
properties
protein length:204 AA
molecular weight: 20384,89780 Da
isoelectric point:5,61168
aromaticity:0,03431
hydropathy:0,49167

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage X2
[NCBI] 		2511833 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRI46366.1 [NCBI]
Genbank nucleotide accession
MW435566 [NCBI]
CDS location
range 38605 -> 39219
strand +
CDS
ATGGCCGATCTGCCCGAACAACCTGCCGGCTGGCCCGGTATCCCGATGATATCGACGTCCGACCCGGTCCTAGGCGGTCAAGACGGACCCGCCAATCGACAAGCTGCGGCGCTGATCTCGCGCTTACAGACGGTACGCAATCTCGTCGACGCAGCCACCGCCGCTCTCGCAACGGTGACCCCGCAGGTCGACCAGCACGTCCAGACGCTCAACGCGCTGCAAGCCTCTGTCAGTTCCGTACAGACGTCCGTGCAGACGGTCAGTGGGGTTGCCACGGCGGCTCAGACCGCGGCCTCTGTGGCCGACGCTAAGGCCGTTGCCGCGCAAACGGCCGCCACGGCAAGGGCGGTGCGCATCGACCTGGGAACTGTCACGGTCACCTACACTGCGAGCACCGCACTGGTGGCCGGCGCACGTTCGATTGCGGTGGCGTGCACCGGGGCTCAGGTCGGCGACGCGATCTTCGTTGCGGCGACCAACGCGATACCGGACGGCTACGCGGTCGGCGCGGCGCAATGTCTGGTCGCCGACACGATCCGCGTATCGGTGATTTACCCTGCGCTGAGCATCGGCAATAGCTTCAGCATCTCCCTGCGTGTCTTCGCGCTGCGGTAA

Tertiary structure

PDB ID
38865a9dbf5a0b80e68e77a0767940d7449e50f95f7763dc24df1457a41f0619
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of five new OP2 related Myoviridae Bacteriophages infecting Xanthomonas oryzae pv. oryzae Ogunyemi,S.O., Chen,J., Wu,X., Wang,L., Masum,M.M.I., Yan,C., An,Q., Li,B. and Chen,J. 2018-10-25 — GenBank