Protein

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Genbank accession
YP_004958049.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MPNDSRLKVSGKMTYPWNPFQDVPGGHVDPEPAHVQGGSDGVIIVPRAGPFFSRDFKIKLADSGRELKMEAGEYGFLFPFGAFIQKYNRLAYGALHVKGVTGPTDFIIEYDTIGGDFVLDDIAYAQAVANTLTAPRTIDWSQLTNLPSVWPSDPHEQPASDTMNYGDLIVWMKSYLDAITATDMNFNFKTAFEAHVKEGLQKAHKGKLEDLGINNLKDWPMATDDDIQGDSTEIIVNMHVLKEAIRGFARGDWR
Physico‐chemical
properties
protein length:254 AA
molecular weight: 28254,53590 Da
isoelectric point:5,01868
aromaticity:0,11024
hydropathy:-0,34567

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage OBP
[NCBI] 		1124849 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004958049.1 [NCBI]
Genbank nucleotide accession
NC_016571 [NCBI]
CDS location
range 127421 -> 128185
strand +
CDS
ATGCCAAATGATTCAAGATTGAAGGTATCTGGCAAAATGACTTATCCTTGGAACCCGTTCCAAGATGTACCCGGTGGTCATGTTGATCCAGAACCAGCTCACGTCCAGGGTGGCTCAGATGGTGTTATTATCGTACCTCGTGCTGGTCCATTCTTCTCTCGTGATTTTAAAATCAAGTTAGCTGACTCCGGTCGTGAACTTAAAATGGAAGCAGGTGAATATGGGTTCTTATTCCCATTCGGCGCATTCATTCAAAAGTACAACCGTTTAGCTTACGGTGCATTGCACGTTAAAGGTGTAACAGGTCCTACTGACTTCATCATTGAGTACGACACCATCGGTGGTGATTTTGTACTGGATGACATAGCTTATGCACAGGCTGTAGCTAACACCTTAACAGCACCACGTACGATTGACTGGTCTCAGTTGACTAACCTGCCTTCGGTATGGCCTTCTGACCCACACGAACAACCAGCATCAGATACCATGAACTATGGTGACTTGATTGTCTGGATGAAGTCTTATCTGGATGCTATTACAGCCACCGATATGAACTTCAACTTTAAGACTGCATTTGAGGCACACGTTAAAGAAGGTCTTCAGAAAGCCCACAAAGGTAAACTGGAAGATCTGGGTATTAACAACCTTAAAGACTGGCCAATGGCTACTGATGACGATATTCAAGGTGACTCTACCGAAATCATCGTCAACATGCATGTCTTGAAAGAAGCTATCCGTGGATTTGCTCGTGGTGACTGGCGCTAA

Tertiary structure

PDB ID
05ebcb7b6072d37b2353bf8a757879aa804595677bb951806aa94fafa228a2a5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50