Protein

View in Explore
Genbank accession
AZF94791.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MYSVQIAVSDGTLTRIALSIEYFEKDDITLYRNLELTPLVLGTDWQWDGDTHINLLTGIPVPVGSYITVRRNTDIDRAFNIYDGGAAFNRETLDENFKQMIYLAQEFTEGNGLTGLYFPLDMHGFQIKNLGEPTDPGDAVTKQYVDTANTAQNASQQAQDQAVAASQAVQDNRLASLENTFVQATSSYPWYTVSTSTTDTFTPGFNFTKAAVYINGVCQTPDYSYIVVANQILLADPVPLGTMVFARLGEDIQNDDDFATTAQLSAVQANLQDEIDVTNTEVSNKASKGANSDISSLSGLTTPLSAAQGGTGNNTGNAATATVLATPRTIQTNLASTSAASFNGSANITPGVTGNLPVTNGGTGAGSAPSARANLGAAMNGINNDISNLAALTGGITGLTTGTAAASGIVGEVASAASSSATNLVSGSVINIISLSLPAGDWELESAFQIINTGNVTALAFGVSTTTGVLPTPWYDVYSITTTIGSGTSNRQGMARRVLLSTTTTVYLVAQATFTGTATANGYVRARRVR
Physico‐chemical
properties
protein length:530 AA
molecular weight: 55379,56910 Da
isoelectric point:4,35548
aromaticity:0,07358
hydropathy:-0,04038

Domains

Domains [InterPro]
IPR005604
3–108
IPR005604
AZF94791.1
1 530
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Nobby_B2
[NCBI] 		2489631 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF94791.1 [NCBI]
Genbank nucleotide accession
MK095206 [NCBI]
CDS location
range 35063 -> 36655
strand +
CDS
ATGTACTCAGTCCAGATTGCCGTATCAGACGGTACTCTAACTCGAATTGCACTGAGCATCGAGTACTTTGAGAAAGATGATATCACGCTGTACCGTAATCTGGAACTGACCCCACTTGTACTGGGTACTGATTGGCAATGGGATGGGGATACCCACATCAACTTGCTGACTGGTATCCCAGTACCAGTAGGTAGCTACATTACTGTACGCCGTAATACAGATATTGACCGTGCCTTTAATATTTATGACGGGGGTGCGGCGTTTAACCGAGAAACCCTTGATGAGAACTTCAAGCAGATGATTTACCTTGCGCAGGAGTTCACTGAGGGTAATGGACTTACCGGCCTGTACTTCCCATTGGATATGCACGGTTTTCAGATTAAGAACTTGGGGGAACCTACCGACCCTGGGGATGCGGTTACTAAACAGTACGTAGATACTGCTAATACTGCACAGAATGCTAGTCAACAGGCGCAGGACCAAGCAGTAGCCGCATCGCAGGCTGTACAAGATAATCGGTTAGCCTCCCTTGAGAATACTTTCGTTCAGGCCACTTCTAGTTATCCGTGGTACACAGTGAGCACTAGTACGACGGACACGTTCACACCCGGCTTTAACTTCACCAAGGCAGCAGTGTACATCAACGGAGTATGCCAGACACCGGACTACAGTTACATCGTAGTGGCTAATCAGATACTCCTTGCAGACCCCGTGCCACTAGGCACGATGGTCTTTGCCCGGCTAGGGGAAGACATTCAGAACGATGATGATTTTGCCACTACTGCACAGCTTAGTGCGGTACAGGCAAACCTACAGGATGAGATTGATGTCACTAACACAGAGGTTAGTAACAAGGCTAGTAAGGGTGCAAACTCCGATATTAGCAGCCTGTCTGGTTTAACCACGCCACTTAGTGCTGCACAGGGTGGAACGGGGAACAACACGGGGAATGCTGCGACAGCAACTGTACTTGCTACCCCCCGAACAATCCAGACTAACCTAGCCAGCACTAGCGCTGCGAGTTTTAATGGTTCAGCTAACATTACACCGGGCGTAACTGGAAATCTCCCAGTTACTAATGGGGGTACCGGGGCTGGCTCCGCACCTAGCGCACGTGCTAACCTCGGCGCAGCTATGAATGGTATCAACAACGATATCTCAAACCTAGCTGCCCTGACAGGGGGTATTACTGGGTTAACTACAGGCACGGCGGCAGCCTCTGGTATTGTTGGAGAGGTGGCTTCCGCTGCGTCTAGTTCTGCTACTAACCTTGTATCTGGTAGCGTTATTAATATTATCAGCCTTAGTTTACCTGCGGGCGATTGGGAACTGGAAAGTGCTTTCCAAATCATAAACACAGGTAATGTGACCGCCCTAGCCTTTGGTGTCAGCACCACCACAGGGGTGTTACCTACTCCGTGGTATGACGTGTACAGCATCACCACTACGATTGGTTCAGGGACTTCGAACAGGCAGGGTATGGCAAGACGAGTACTACTAAGCACCACCACCACTGTGTACCTTGTAGCACAGGCGACCTTTACAGGTACAGCTACCGCTAATGGGTACGTACGCGCGAGGCGAGTTAGATAA

Tertiary structure

PDB ID
8c8cbca371684fcde6465e7c0c0de307f82711da9efbeab19b8f8a24c88d053c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7528
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel 6-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions Carstens,A.B. 2019-05-01 — GenBank