Protein

View in Explore
Genbank accession
AZU99659.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MPRVPQSHNNTTPVEKFDNTAYDAVELVAENIEEVIAAAGGVDVMNLYLGAFENAPTEGRDGAPLVAGNFYLNETDGNLQYYDADPGVWVVSDADTVVQAAQQAQDARDSALTAMSDSQDARDAAQASQVAAATSEANAATSESNASTSEANANTSANNAANSETAAALSEINAGNSELAAAASEAAAGTSETNASTSAASASAFADSSALSASAADVVLTNFESKYLGAKTSPPLLDNTGQPLQIGATYWQDFGGNQGELRYWDGNDWGAIVASNSLVTPTDRLTARTLANHFADFVNIKDFGAVGDGIVDDTAAIQAAIDFVIAQGGGRVYIPSADVYYKVTTQDENKACLWVHGNNVTISGDGYKSIIKTEANAHIPLHFSSQESIATPAVGTELRNFEVYGIVIQGTGVYQNFGLAKGRGILFRNVINVNVHDNQVYDMSMIGICAESGDGYFKVVNNQVHDCKYTGINFNGRCYQSIISGNIVSGCNGDINSLAIQATGHCIITSNTVYGDVISNAANCGGIAWGEGNYDGHGVIANNLVKNVSWGIQAIYHGACNITGNTVINATNRGGIILSSTNTPSFTVANSDNICANNLLLNCAPYGITCSAEDTSLNGNVIRTYTPITNPSALTEPDFVSGVITEQGIRIRGSRCSVRGNTISGCTFGLSTTITQKNGIIQGNEFKGNTNDYALESETPGIFAVTDHAILEREVSSPERYRERIFRDTLPDQGYFNAGSRWDDPTPAIGVPIGYICLFDEDTSIVSAQANAGDSVVIVTNPGGWLGTGFGSICGFEMDNGTWHWTQLTSKSGNDLTITTPVPAGRFIPVNAKTTYSHWRALPNLA
Physico‐chemical
properties
protein length:846 AA
molecular weight: 89073,79000 Da
isoelectric point:4,44478
aromaticity:0,07920
hydropathy:-0,15887

Domains

Domains [InterPro]
IPR011050
295–626
IPR011050 IPR006626 IPR006626
IPR024535
297–498
IPR024535 IPR006626 IPR006626 IPR006626
IPR012334
298–626
IPR012334
IPR006626
403–429
IPR006626 IPR006626 IPR006626 IPR006626 IPR007742
AZU99659.1
1 846
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio virus vB_VspP_SBP1
[NCBI] 		2500581 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU99659.1 [NCBI]
Genbank nucleotide accession
MK301608.1 [NCBI]
CDS location
range 56249 -> 58789
strand -
CDS
ATGCCTCGCGTACCACAGAGCCACAATAATACGACTCCAGTCGAGAAGTTCGATAACACTGCATATGATGCGGTGGAACTAGTCGCTGAGAATATCGAAGAAGTTATTGCTGCCGCTGGTGGTGTAGACGTTATGAACCTTTACTTGGGTGCATTTGAAAATGCCCCAACTGAAGGTCGTGATGGCGCACCTCTTGTAGCCGGTAACTTTTACCTAAATGAAACTGACGGCAACTTGCAGTACTACGATGCTGACCCTGGTGTATGGGTTGTGTCGGATGCCGATACTGTAGTGCAGGCAGCACAACAAGCACAGGATGCCCGTGACTCCGCTCTTACTGCAATGAGTGATTCACAAGATGCACGTGATGCGGCTCAAGCTTCTCAAGTTGCTGCTGCTACATCGGAAGCAAATGCCGCGACCTCCGAGTCAAATGCATCAACCTCCGAAGCTAACGCTAATACCTCTGCGAATAATGCTGCAAACAGTGAAACGGCTGCTGCTTTGTCAGAGATTAATGCTGGTAATTCAGAACTTGCTGCGGCTGCAAGTGAAGCTGCTGCAGGTACATCTGAAACGAATGCCAGTACGAGTGCGGCCTCTGCTTCCGCTTTTGCTGACTCTTCAGCTTTATCAGCTTCAGCGGCTGATGTCGTACTCACAAATTTTGAAAGTAAATATCTCGGTGCTAAAACTTCTCCTCCTTTACTTGATAACACAGGGCAGCCGTTACAAATTGGTGCTACTTATTGGCAGGATTTTGGTGGTAATCAAGGTGAATTAAGGTATTGGGATGGTAATGATTGGGGAGCCATTGTTGCCTCTAATTCTTTGGTTACACCGACGGACAGACTTACAGCTAGAACTTTGGCTAATCACTTTGCAGATTTTGTGAATATAAAAGATTTTGGGGCTGTAGGAGATGGCATTGTAGATGATACTGCTGCTATTCAAGCAGCCATTGATTTTGTAATAGCACAAGGTGGCGGTCGAGTGTACATACCCTCTGCGGATGTGTACTACAAAGTCACAACACAAGATGAAAATAAAGCCTGTCTGTGGGTTCATGGGAACAATGTGACAATTTCCGGAGATGGGTATAAAAGTATAATTAAGACAGAAGCTAATGCACATATTCCGTTGCACTTCTCTAGCCAGGAGAGTATTGCAACACCCGCTGTAGGTACAGAACTTCGTAATTTTGAAGTATATGGCATTGTAATACAAGGTACAGGTGTCTATCAGAATTTCGGCTTAGCTAAAGGTCGTGGTATTCTTTTTAGAAATGTTATTAATGTGAATGTCCATGATAACCAAGTGTATGATATGAGCATGATTGGTATTTGCGCGGAAAGTGGCGATGGGTACTTTAAAGTTGTTAATAATCAAGTCCATGATTGTAAATATACGGGTATTAACTTCAATGGGCGTTGTTACCAAAGTATCATCTCCGGTAATATTGTTTCTGGTTGCAATGGAGATATCAATTCTTTGGCTATTCAAGCAACAGGTCACTGTATTATCACTAGTAATACGGTATACGGAGATGTAATTTCAAACGCTGCAAATTGTGGTGGTATTGCTTGGGGTGAAGGCAATTATGACGGCCATGGGGTGATTGCTAATAACCTAGTAAAAAACGTATCATGGGGTATTCAAGCAATCTATCACGGGGCTTGCAATATTACAGGTAATACAGTAATTAATGCAACTAATCGTGGAGGTATAATTCTAAGCTCAACAAATACCCCTAGTTTTACGGTGGCTAATTCTGATAATATTTGTGCTAATAATCTGCTTTTAAACTGTGCTCCGTATGGTATTACGTGCTCAGCAGAAGATACCTCTCTTAACGGTAACGTAATCAGGACGTACACGCCAATAACGAACCCGAGTGCGTTAACAGAACCTGATTTTGTTTCAGGTGTAATAACAGAGCAGGGCATACGTATACGAGGTTCTCGTTGTAGTGTCAGAGGTAACACAATCTCAGGCTGTACGTTTGGATTATCTACTACTATCACTCAGAAAAATGGTATTATTCAAGGTAATGAATTCAAAGGTAATACCAATGATTACGCATTAGAAAGCGAAACGCCCGGCATCTTTGCAGTAACAGACCATGCTATCCTTGAGCGAGAAGTTTCATCCCCTGAACGCTACAGAGAGAGGATTTTCAGAGATACTTTACCAGACCAAGGCTACTTTAATGCAGGTTCCCGTTGGGATGACCCTACTCCAGCTATAGGAGTCCCTATTGGGTATATTTGTCTCTTTGATGAGGACACCTCTATTGTAAGTGCGCAAGCAAACGCAGGGGATTCTGTAGTTATAGTAACCAATCCAGGAGGGTGGTTAGGAACCGGGTTTGGTAGTATATGTGGTTTTGAGATGGATAACGGTACATGGCATTGGACACAGTTGACATCCAAATCAGGCAATGACTTGACAATTACAACACCTGTTCCAGCAGGTCGTTTTATACCTGTAAATGCAAAGACAACTTATTCTCACTGGAGGGCTTTACCAAATCTGGCGTAA

Tertiary structure

PDB ID
8b1a3929f5d9fea240de130f5629664e3ffebfd0fdbb7590a467684ec030aec2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a N4-like bacteriophage infecting a coral-derived Vibrio strain Huang,S. 2019-10 — GenBank