Protein

View in Explore
Genbank accession
QBI82427.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MADTIDLDGEKFVSPSFVTSATSLDDIYTAWVADFQGPTTAYNPSWPSTDDSATLLPIPPLWTGGADRLVVSTECGVEIVPYQFTSASTHYSQAIAGVSRYYSINCGLRLAIIFHPTGVDSGITSFSGNYNADLALFRGTHNRSSENVQFVARVVPGRQIDVAIKNTAQTAGLPIKLVVLNGTTVVSSTDLTTIVQGGVTLVTCSIYGGTVSGTVVDQAGQPATRIVHVHERETGSVIGRGRSDSSGLFEIPVIAKVGTTMYVVGLDDENSPLINAVIADRIVLE
Physico‐chemical
properties
protein length:285 AA
molecular weight: 30130,48230 Da
isoelectric point:4,76876
aromaticity:0,07368
hydropathy:0,15789

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF63a
[NCBI] 		2563582 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI82427.1 [NCBI]
Genbank nucleotide accession
MK511040 [NCBI]
CDS location
range 28909 -> 29766
strand -
CDS
ATGGCCGACACCATCGACCTGGACGGCGAAAAATTCGTCTCTCCATCATTCGTCACCAGTGCGACATCGCTCGACGACATCTATACCGCCTGGGTGGCCGACTTCCAAGGCCCAACGACGGCCTATAACCCTAGCTGGCCGAGCACCGATGATAGTGCGACGCTGCTACCAATCCCGCCGTTGTGGACCGGCGGCGCCGATAGGTTGGTTGTTTCTACCGAGTGCGGTGTGGAGATTGTCCCCTACCAGTTCACCTCGGCCAGTACGCACTACTCACAGGCGATCGCAGGAGTTAGCCGGTACTACTCGATCAACTGCGGGCTGCGCCTGGCGATTATCTTCCACCCGACTGGTGTCGACTCAGGTATTACCAGCTTTTCGGGCAACTACAACGCCGACCTGGCGCTATTTCGCGGCACGCATAACCGATCCAGTGAAAACGTCCAATTCGTGGCGCGTGTCGTTCCGGGCAGGCAAATCGATGTGGCCATCAAGAACACCGCCCAAACTGCTGGACTCCCCATCAAGCTGGTGGTCCTCAACGGCACCACTGTGGTGTCTTCCACCGACCTGACTACGATCGTTCAGGGTGGTGTCACACTGGTGACATGTTCCATCTACGGTGGAACCGTCTCGGGCACCGTCGTGGACCAGGCTGGCCAGCCTGCTACCCGCATCGTCCATGTTCACGAGCGCGAAACAGGGTCGGTGATTGGTAGAGGACGCAGCGACTCATCAGGTCTGTTCGAAATTCCGGTCATCGCGAAGGTGGGTACCACCATGTACGTAGTCGGCCTGGACGATGAGAACTCGCCGCTGATCAATGCTGTGATCGCCGATCGCATCGTGCTGGAGTAG

Tertiary structure

PDB ID
5210de8eb33b8bc3978c930dc74c63aa9556ff2d3f30e9a80319130fdef89be6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank