Protein

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Genbank accession
QNH72075.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MLISAITGDQNFPNGSAKLHLFFVPTRQRMGQEVHIGQLARGVNPDVPCSATNIRRFNAMNGAPETLGKWTQANYDVPEGVVLKLFGTRRTSIQGQNIGSASAVIYVQARSNAALTSIDFSLIPNDRSPITRAELQGRFDILTGAELAQLGVSMNQQTLMSMSERNVSRVFALRTLERQLQAKQTVRTTTVNNSDGEAVVIQKQVARRAVKL
Physico‐chemical
properties
protein length:212 AA
molecular weight: 23224,24950 Da
isoelectric point:10,58721
aromaticity:0,05189
hydropathy:-0,22170

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage P11VFA
[NCBI] 		2763530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNH72075.1 [NCBI]
Genbank nucleotide accession
MT778840 [NCBI]
CDS location
range 48362 -> 49000
strand -
CDS
ATGCTCATTTCCGCAATCACTGGCGACCAGAACTTCCCGAACGGCAGCGCGAAGCTGCATCTCTTTTTCGTCCCGACGCGGCAGCGCATGGGGCAGGAGGTTCATATTGGTCAGCTTGCCCGAGGCGTCAACCCAGACGTTCCCTGCTCTGCCACCAACATCCGCCGCTTCAATGCGATGAATGGCGCTCCCGAAACCCTTGGGAAGTGGACGCAGGCCAACTACGATGTCCCAGAGGGTGTCGTGCTCAAGCTCTTCGGCACCCGGCGCACCTCCATCCAGGGGCAGAACATCGGGTCCGCCTCCGCAGTCATCTATGTCCAGGCGCGCTCGAATGCGGCGCTGACAAGCATCGACTTCAGCCTTATCCCTAACGACCGTTCGCCGATCACGCGGGCAGAGTTGCAGGGTAGGTTCGACATTCTCACAGGTGCGGAACTCGCACAGCTTGGCGTCTCCATGAACCAACAGACGCTGATGTCCATGAGCGAGCGCAACGTGAGCCGGGTATTCGCGTTGAGAACCCTTGAACGGCAGCTTCAGGCAAAGCAGACCGTCCGGACCACCACCGTGAATAATTCTGATGGCGAAGCTGTCGTCATTCAGAAGCAGGTAGCAAGGCGTGCCGTCAAGCTCTGA

Tertiary structure

PDB ID
0de6ff0b88158b24b020b5fc25f0408def4b946f1039cf4a43839e78c5a2ac9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3423
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegS_P11VFA Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2020-03-12 — GenBank