Protein

View in Explore
Genbank accession
WPK33384.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MTEQIDNIALREALKKMFSVGTHSLQFTKKDGTVREMIATRDPALMPFETYEKWLVPNVEKPRKESETSLPVYEIAVEGFRSFGLDSLINVDGLTPAQIVEIYK
Physico‐chemical
properties
protein length:104 AA
molecular weight: 11849,51010 Da
isoelectric point:5,16726
aromaticity:0,08654
hydropathy:-0,27885

Domains

Domains [InterPro]
IPR024401
12–89
IPR024401
WPK33384.1
1 104
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV108
[NCBI] 		3077253 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK33384.1 [NCBI]
Genbank nucleotide accession
OR352938.1 [NCBI]
CDS location
range 42085 -> 42399
strand -
CDS
ATGACCGAACAAATTGATAATATCGCACTTCGTGAAGCACTAAAGAAAATGTTTTCGGTTGGTACTCACTCTTTGCAGTTTACTAAGAAAGATGGTACTGTCCGCGAGATGATCGCCACGCGAGATCCGGCACTGATGCCTTTCGAAACATACGAAAAGTGGTTAGTTCCGAATGTTGAAAAACCGCGTAAAGAATCAGAAACATCTTTGCCAGTATATGAAATTGCAGTTGAAGGTTTCCGTAGTTTTGGGCTTGATAGTCTGATTAATGTGGACGGGCTGACTCCAGCGCAGATCGTCGAAATTTATAAATAA

Tertiary structure

PDB ID
d659a5c5e3096424452e55d2f04082448a767cd416dc897fad00b80c00658801
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank