Protein

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Genbank accession
YP_010667509.1 [GenBank]
Protein name
concanavalin A-like lectin/glucanase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSSTNQFPYAFAGTKVKMPYLGAGYIAGEAPPPLVPDHPDGRTYVDYQIKPLVVKVLHADSFTPIAEVKSLLDGTWRIEGLDPAQRYQVIFQNDTYRDSSNTLYNSFIQDWISAVPMTYVAPPDELLMSVPLVMDRWAMPTTIQAWSVNGGVLTTPTFSGSFTGVTVEANKTSVNVRLVPVQQIGTYTLQVSAVKDSNTITTRLRTFKIRPQQVDTQQFVRFALLGTAAGPASAISTWNRALNNNGTLTNGTFIADADALSSDYPVSLNSDWSADIISGGMYNDGAGNWISLNNGYNNGVTVEGWFNVSTWPTTDSAMLTSIQTSNSGSSLIGLTLLPSKRIGTIMKYGSTNSARFENVGDAEYTLPTGEWFHVLVHIPPSQSDGYLYINGQYVDKWSMIKRNTVPTNTNLTIGYVTFMCNNGQGCTGTAVAKCNRVVWLESRFSNQNFTPSKNKYHEYQATVQCATYGVNGNAVNEMSSCDGTWNTTGNVSSRPVFDPVEGVVFPNTTATDGYAWINISRGYGGVKGSFCLDVWFKPLTAYNGDKNIIQLGNSGSADGRMHIALNNGKLKSFCAPYTAATGVTMNGTTVLNNNQWYLATLCCDVIQREWRLYLDGTLEASIADPTLAPLALPATSSLIQIILGGRHPLNNSGSGTIPSFHGVIGATRLTVNGPRYYSGFTPTGIGAWDALPARPAA
Physico‐chemical
properties
protein length:697 AA
molecular weight: 75522,02210 Da
isoelectric point:6,26124
aromaticity:0,10330
hydropathy:-0,15280

Domains

Domains [InterPro]
G3DSA:2.60.120.200
243–437
G3DSA:2.60.120.200 G3DSA:2.60.120.200
IPR013320
284–417
IPR013320 IPR013320
PF13385
285–415
PF13385 PF13385
YP_010667509.1
1 697
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas maltophilia phage vB_SmaM_Ps15
[NCBI] 		3071007 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010667509.1 [NCBI]
Genbank nucleotide accession
NC_070951 [NCBI]
CDS location
range 19312 -> 21405
strand +
CDS
GTGAGTAGCACAAATCAATTTCCATACGCTTTTGCCGGCACAAAGGTGAAGATGCCCTATCTTGGTGCCGGCTATATCGCTGGCGAAGCGCCACCTCCGCTTGTACCTGATCATCCGGATGGCAGAACCTATGTCGACTATCAGATCAAGCCTCTGGTTGTCAAGGTCTTGCACGCCGACTCGTTCACTCCAATCGCTGAGGTGAAGTCTCTTTTGGATGGTACATGGCGCATTGAAGGTTTGGATCCAGCGCAGCGATATCAGGTGATCTTCCAGAACGACACATACAGGGACAGTAGCAACACGCTATACAACTCCTTCATCCAGGATTGGATTAGCGCTGTCCCTATGACCTATGTGGCACCTCCAGACGAACTATTGATGTCTGTGCCTCTTGTGATGGATCGATGGGCTATGCCGACCACTATCCAGGCTTGGTCTGTCAATGGTGGAGTGTTGACAACTCCTACCTTCTCCGGCTCATTCACTGGGGTGACGGTCGAAGCCAACAAGACCAGCGTGAATGTGCGGCTAGTACCTGTGCAACAGATCGGTACGTATACCTTGCAGGTATCGGCTGTCAAGGATTCAAACACTATCACGACTAGATTGAGAACCTTCAAGATCAGACCACAGCAAGTGGACACGCAGCAATTCGTCCGCTTCGCTTTGCTTGGCACGGCGGCAGGTCCGGCTAGCGCCATCTCCACTTGGAACCGTGCGTTGAACAACAATGGCACCTTGACAAATGGAACGTTCATTGCAGATGCAGACGCGCTGTCGTCAGACTATCCGGTGTCCCTGAACAGTGACTGGTCGGCTGATATCATCTCTGGTGGTATGTACAATGATGGTGCAGGTAACTGGATCTCGCTGAACAACGGTTACAACAACGGAGTCACAGTCGAGGGATGGTTCAATGTGTCGACTTGGCCTACCACTGATTCGGCTATGCTTACGTCGATCCAAACATCCAATTCTGGGTCATCGCTTATCGGCTTGACTCTTTTGCCGTCTAAGAGAATCGGCACTATCATGAAGTATGGCTCGACTAACTCGGCTAGGTTCGAGAATGTGGGTGACGCTGAGTACACGCTGCCGACTGGAGAGTGGTTCCATGTGCTGGTTCATATCCCACCCAGCCAGTCTGACGGCTATCTGTACATCAACGGTCAGTATGTGGACAAGTGGTCGATGATCAAGCGGAACACAGTTCCTACCAACACCAACCTGACCATCGGCTATGTCACCTTCATGTGCAACAACGGTCAGGGCTGCACAGGCACAGCTGTGGCCAAGTGCAACAGGGTTGTGTGGCTTGAGAGCCGATTCTCTAACCAGAATTTCACTCCGTCAAAGAACAAGTATCACGAGTATCAAGCCACCGTCCAATGTGCCACCTATGGAGTCAACGGCAACGCTGTGAATGAGATGAGCTCTTGCGATGGCACATGGAACACGACTGGTAATGTATCATCAAGACCTGTGTTCGATCCAGTCGAGGGTGTGGTCTTCCCGAACACAACAGCGACAGATGGATATGCTTGGATCAACATCTCGCGCGGTTATGGTGGTGTCAAGGGTTCATTCTGTCTGGATGTATGGTTCAAGCCTCTGACAGCATACAATGGTGACAAGAACATCATCCAGCTGGGTAATTCTGGCTCAGCTGATGGTCGTATGCACATCGCCCTGAACAATGGTAAGCTGAAGTCGTTCTGTGCGCCATACACAGCTGCGACGGGTGTCACCATGAACGGGACGACGGTGCTGAACAACAATCAGTGGTATCTGGCCACCTTGTGCTGCGATGTGATCCAGCGCGAGTGGAGACTCTATCTGGATGGTACGCTTGAGGCTAGCATCGCTGACCCCACGCTTGCACCGTTGGCATTGCCGGCTACCTCGTCTCTGATCCAGATCATCTTGGGTGGTCGTCACCCACTGAACAACTCGGGTAGCGGAACGATCCCATCGTTCCATGGCGTCATCGGTGCAACACGATTGACTGTCAATGGTCCTCGCTACTACTCCGGCTTTACGCCTACCGGCATCGGCGCATGGGATGCACTGCCAGCTCGCCCAGCGGCTTAA

Tertiary structure

PDB ID
153dc0159efa092531b65d3d4a953c426a4c2dee28c8c3c8e1b2703d10f60f9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6037
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of bacteriophage vB_SmaM_Ps15 infective to Stenotrophomonas maltophila clinical ocular isolates Damnjanovic,D., Vazquez-Campos,X., Elliott,L., Willcox,M. and Bridge,W.J. — — GenBank