Protein

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Genbank accession
CAB5223140.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MDLKKIILSDVSVEAKVSALAILLNKELPKLTEKVDTVKKLKGEQGDRGPQGDKGDAGKVGKDGVNGKDGKDGVDGKDGADGVDGVSVTDAKVDFDDSLVFTLSNGKTINVGEVKGEKGDKGERGAAGSSGISDGSFTPVYMEANEVFTVTKNKQALFTREIQFEAGAVIAFEQRSVLLEVT
Physico‐chemical
properties
protein length:182 AA
molecular weight: 19064,16780 Da
isoelectric point:4,88062
aromaticity:0,04396
hydropathy:-0,38626

Domains

Domains [InterPro]
IPR050938
39–131
IPR050938
IPR008160
43–85
IPR008160
CAB5223140.1
1 182
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5223140.1 [NCBI]
Genbank nucleotide accession
LR798305 [NCBI]
CDS location
range 33545 -> 34093
strand -
CDS
ATGGATTTAAAGAAGATCATCCTTTCTGATGTCTCTGTAGAGGCAAAGGTATCTGCGCTTGCGATTCTGCTTAACAAGGAATTGCCCAAGTTAACGGAGAAAGTTGATACCGTCAAAAAACTCAAGGGTGAGCAAGGTGACCGTGGGCCGCAGGGCGACAAGGGTGATGCTGGTAAAGTCGGTAAGGACGGGGTTAACGGCAAGGATGGCAAGGACGGGGTTGACGGAAAAGACGGTGCTGATGGAGTTGACGGTGTATCGGTAACCGATGCAAAAGTTGATTTTGACGATTCCTTAGTGTTTACTTTGTCGAATGGCAAAACAATCAATGTTGGCGAAGTAAAAGGCGAAAAAGGCGATAAAGGTGAGCGCGGCGCGGCTGGTTCGTCAGGGATTTCAGACGGTTCTTTCACTCCGGTTTACATGGAAGCCAATGAAGTTTTTACAGTAACAAAGAACAAACAAGCCTTGTTCACACGCGAGATTCAGTTTGAGGCTGGAGCCGTTATTGCTTTTGAACAAAGAAGTGTTTTACTTGAGGTCACATAA

Tertiary structure

PDB ID
87fab79a8a0b00f74b1c3f33621eafddedbfbc5f4448c9ffa286cfa3677a880b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50