Protein

View in Explore
Genbank accession
BDD79349.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MYTFVRALAVQPGTNKRWSVVDISTALTSTLLTKYRQIYVVLTDGITDTELTLDLENVAAGIQANVGTISDYLTANGNKTLPTVVGSPVIVRNNAIFSDLWEADFWADSIDYMVGAGVELTQEQKPHVVVKPDNPGDQQGFDYVSMRSKILPNVNGFYHNSAADSKGYYIIDGNKSRMKSGANQLGLLSFATFGTFDIHAITPDMLSFDLNPDTGLVDKVHIEFTECDLCVKTPILILGGYMLLPDNDQVLLTNTNVLTFKTFKYPFLERYFESEPYLDFSAFNIQHQVDNPNWVIAQQFKSQAYLQNYFTMSQSFMVLLDTSNLVVERTYPEKQTVPHTFMSWEEPKWPLVTGEGKHEVYWSQYEAGGWLLRCHDTFKRNYLFNTVGSDDRVAVDNQMWMGKAGTLGDAMFVKLIEEEIQIQVA
Physico‐chemical
properties
protein length:425 AA
molecular weight: 47998,77570 Da
isoelectric point:4,76324
aromaticity:0,12000
hydropathy:-0,16118

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC8
[NCBI] 		2906466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79349.1 [NCBI]
Genbank nucleotide accession
LC667450 [NCBI]
CDS location
range 68215 -> 69492
strand -
CDS
ATGTACACCTTCGTTCGTGCTCTCGCCGTTCAACCCGGCACAAATAAACGCTGGTCCGTTGTCGATATCTCGACTGCACTGACGAGCACTCTCCTGACCAAATACCGCCAGATCTACGTCGTCCTGACGGACGGAATCACCGACACGGAATTGACGTTGGATCTGGAAAACGTTGCTGCTGGCATCCAGGCCAATGTGGGGACGATTTCAGACTATCTGACCGCGAATGGCAATAAAACTTTACCTACGGTTGTAGGTAGTCCGGTCATCGTTCGAAACAACGCAATCTTCAGTGATTTGTGGGAAGCTGACTTCTGGGCAGACTCCATCGACTACATGGTCGGAGCAGGTGTGGAGTTGACTCAGGAACAGAAACCGCACGTGGTTGTGAAGCCCGACAATCCCGGCGATCAGCAGGGTTTCGACTATGTGTCGATGCGCTCGAAGATCCTGCCCAACGTGAATGGTTTCTACCATAACTCGGCAGCTGACTCGAAAGGCTATTACATCATCGACGGTAACAAGTCGCGGATGAAGTCAGGTGCGAATCAACTGGGTCTTCTGTCGTTCGCTACTTTCGGTACGTTTGACATCCATGCGATCACGCCTGACATGCTGTCGTTCGATCTGAACCCGGATACGGGTCTGGTCGATAAGGTCCACATCGAATTCACCGAATGCGATCTGTGCGTAAAGACGCCCATCCTGATTCTCGGCGGCTACATGCTCTTGCCGGATAACGATCAGGTGTTGCTCACCAATACGAACGTGCTGACATTCAAGACGTTCAAGTACCCGTTCCTGGAACGTTACTTCGAGAGCGAGCCGTATCTGGACTTCTCGGCGTTCAACATCCAGCATCAGGTCGACAATCCGAACTGGGTGATCGCGCAGCAATTCAAGTCGCAGGCTTACCTCCAGAACTACTTCACCATGAGCCAGTCTTTCATGGTGTTGCTCGATACGTCGAATCTGGTGGTCGAGCGTACCTATCCGGAAAAGCAAACCGTTCCCCACACGTTCATGTCGTGGGAAGAACCCAAGTGGCCTCTGGTCACGGGGGAAGGCAAACATGAAGTCTACTGGTCGCAATACGAGGCTGGTGGCTGGTTGCTCCGCTGCCACGACACATTCAAACGAAACTATCTGTTTAACACTGTTGGCTCGGATGATCGGGTAGCAGTGGATAACCAGATGTGGATGGGTAAAGCAGGGACATTGGGCGACGCCATGTTCGTGAAACTCATCGAAGAAGAGATTCAGATCCAGGTGGCATAA

Tertiary structure

PDB ID
a5dca439759b1989a15bffd9cfde59862825e60418c06adf1b9ac1023a14c719
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank