Protein

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Genbank accession
ABT18008.1 [GenBank]
Protein name
orf20
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHEIGNERDITTDSAPKIGVNVQQVSFGAKKIKLTVSLATRDLNDNAFVDPNEPAQIDYNMFHHVREQAARVLHSDKPVELKLPDEPDRYYLAIVTGEASLKGISDWYDQAEIEFLVPDGVAHSTTYRSFENPKSVNEKLVFDLVNDGSVNANPIITVKHNSENGYIGLVNSTGICELGDRLEANTEDYRHSEVLFDYASSNSEHRIPNGLSQGLKNIGISNDVNDTKPNGTLYIDNAWGRPHIALQSGQVASVTFDIPRDSSGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETFKRYNGLGCEYNFLAADGKGGFRIVDKKNFLGTHIEQHNPFNEPRGWSDIMRFDDVVQFYWWGSYPRYSIPEIKGKKSDKIHVIFGKVGNAPLVTHMYLDDFIYRKDYVLGVRDIPNRYRAGGEVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWVTTKPSVSVKFEERYI
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57693,90160 Da
isoelectric point:5,26780
aromaticity:0,11742
hydropathy:-0,40157

Domains

Domains [InterPro]
G3DSA:2.40.30.200
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
14–137
IPR008841
IPR006520
83–143
IPR006520
ABT18008.1
1 511
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage 858
[NCBI] 		2914004 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABT18008.1 [NCBI]
Genbank nucleotide accession
EF529515 [NCBI]
CDS location
range 15046 -> 16581
strand +
CDS
ATGGCCGTGTTTCAATTTAACGGATATGATTTGAATGATTACTTCAAATTAATCAAAGTGTCGCACGAAATTGGGAATGAACGCGATATCACTACAGACTCAGCCCCTAAAATTGGGGTTAATGTTCAACAAGTTTCGTTTGGTGCTAAAAAAATAAAATTAACTGTCAGCTTAGCAACTAGAGACCTTAACGATAATGCTTTCGTAGACCCAAACGAGCCCGCTCAAATTGATTACAACATGTTTCATCACGTAAGGGAACAAGCGGCTAGAGTGCTACACTCTGATAAACCGGTAGAATTGAAATTACCTGATGAGCCAGATAGGTACTATTTAGCGATAGTGACAGGAGAAGCTAGTTTGAAAGGTATCTCTGACTGGTATGACCAGGCTGAAATTGAATTCTTAGTACCTGACGGTGTTGCACATTCAACCACTTACCGAAGTTTCGAAAACCCCAAATCGGTAAATGAAAAGCTAGTATTTGACCTTGTTAACGATGGATCAGTTAATGCTAACCCAATAATTACAGTGAAGCACAATAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTATCTGCGAGCTTGGGGACAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCGTCAAACAGTGAGCACAGAATCCCTAACGGTTTATCTCAAGGATTGAAAAACATTGGCATCTCAAACGATGTCAACGACACCAAGCCAAACGGAACTCTTTACATCGATAACGCTTGGGGTCGTCCTCACATTGCATTACAGAGTGGTCAAGTAGCATCTGTTACTTTTGACATCCCAAGAGATTCAAGCGGTGAAAAAGGTGCGCTATATGAATACTTTTGGTGGAGGCAAATTTTCTGGCTTGGTTCTGCGAATCAGATGGGCTATCTGAAAATTTGCGTCACAGATGCAAGCGGCACTTTCTTGTATGGTGTCGAAACTTTTAAACGTTACAATGGTTTAGGCTGTGAATATAATTTTCTAGCTGCTGACGGCAAGGGAGGTTTCCGTATTGTCGACAAGAAGAATTTTTTAGGCACACACATCGAGCAGCACAACCCATTTAATGAACCAAGGGGTTGGTCAGATATAATGAGGTTTGATGATGTCGTCCAATTTTATTGGTGGGGGTCATACCCAAGATATTCTATCCCCGAAATCAAGGGGAAAAAATCAGATAAAATTCATGTCATTTTTGGTAAGGTCGGCAACGCACCACTTGTTACACACATGTATTTAGATGATTTCATTTACCGAAAAGACTACGTCTTAGGTGTCAGGGATATCCCTAATAGATACCGCGCTGGTGGGGAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGCTCTGACTTCCTCACAATCCCACCAGGAAAATCACAGCTAGAAGTCTACTGCTCAAGCTGGGTAACAACTAAACCATCCGTATCTGTTAAATTTGAGGAGAGATATATATAA

Tertiary structure

PDB ID
1714e3190a4b0885e6b44d71d82c381b00d93d9d7ed987bcbcae6137828ce3bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage response to CRISPR-encoded resistance in Streptococcus thermophilus Deveau,H., Barrangou,R., Garneau,J.E., Labonte,J., Fremaux,C., Boyaval,P., Romero,D.A., Horvath,P. and Moineau,S. 2008 18065545 GenBank
Phage-host interactions are modulated by CRISPR in Streptococcus thermophilus Sylvain,M. and Deveau,H. 2006-04 — GenBank