Protein

View in Explore
Genbank accession
XOD41093.1 [GenBank]
Protein name
putative long tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPKKTTAIPSIQFYRTNTRGAAPAASDLKEGELALNLADGQLFAKGTSTIASIGLPSAADAVTNYRITAKELVSTGASTINGTLTVGTTGSGNSNLNFASPVGTGQIYFNTAGQFVINAVGTSTGTTATIYIRPVTSSSTNQTIFRPDGLVDLPKLNVQGISAFRADMTLQGSLFTNKAATFGSDTGQNKIILDPTVTNPVIRFTGTNSADVKAQIFGMAQAGANTALQMRVGSDATRDMNLMTDGTVSAYALQSRNNARILASDTTNWTSIVLADSNNAERGILFADKDGVIGLRNRNGEIIAWNQSNILHIQKGSLNVGYNAGGDQNGNDLYTKGALFNKGYLEFYGNNIAANTSRSINMLKSIFAGTPWGTQVYAERTSDGFINQVFQVSANFGTAGSKDDTNNSWFVMRHDGLFSIPGNINVNGAQESFFAGDISANNVKIRSDRTVKKNIKSIDNALDKIMGLDGSTYLDEHNNVSAGLMAQDVQEVLPEAVTEDTSGLLRLNYNAVIGLLVNAVKELREEVKQLRGE
Physico‐chemical
properties
protein length:533 AA
molecular weight: 56672,59510 Da
isoelectric point:6,05320
aromaticity:0,07129
hydropathy:-0,20544

Domains

Domains [InterPro]
IPR030392
447–498
IPR030392 Coil
IPR030392
447–533
IPR030392
XOD41093.1
1 533
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage WSPA
[NCBI] 		3384840 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD41093.1 [NCBI]
Genbank nucleotide accession
PQ600363 [NCBI]
CDS location
range 124144 -> 125745
strand -
CDS
ATGCCAAAGAAGACTACTGCTATTCCAAGCATCCAATTTTATAGAACAAATACTCGAGGAGCTGCGCCAGCAGCTTCTGATTTAAAAGAAGGCGAGTTAGCACTTAACTTAGCGGACGGGCAACTGTTTGCCAAAGGAACAAGTACTATAGCTTCTATCGGTTTACCTAGTGCAGCCGATGCTGTCACAAATTATCGTATTACAGCAAAAGAACTAGTTTCAACAGGTGCATCTACAATCAATGGAACACTTACTGTGGGCACTACAGGGTCAGGTAACTCCAATTTGAACTTTGCATCCCCTGTTGGAACAGGACAAATCTATTTCAACACGGCAGGTCAATTCGTTATTAATGCAGTAGGTACTTCTACCGGAACTACCGCTACAATTTATATTCGTCCTGTTACTTCAAGTTCAACAAACCAGACAATATTTAGACCTGATGGTCTTGTAGATTTGCCTAAGCTTAATGTCCAAGGTATTTCTGCTTTTAGAGCTGACATGACTTTACAAGGCAGTTTATTCACTAACAAAGCTGCTACATTTGGTTCTGATACTGGTCAAAACAAAATCATTTTAGATCCTACAGTGACAAACCCTGTTATTCGTTTCACTGGAACTAATAGTGCTGATGTCAAGGCTCAAATTTTTGGTATGGCCCAAGCAGGTGCTAATACAGCATTACAAATGCGTGTCGGGTCTGATGCAACCAGAGATATGAATTTGATGACCGATGGCACAGTGAGTGCATATGCATTACAATCTCGTAATAATGCGCGTATTTTAGCATCAGATACTACAAACTGGACATCTATTGTATTGGCAGATTCTAATAATGCAGAGCGCGGTATTTTATTTGCAGACAAAGATGGTGTTATTGGCCTTAGAAATAGAAACGGTGAAATTATTGCTTGGAATCAAAGCAATATATTACATATCCAAAAAGGTTCATTGAACGTAGGTTATAACGCAGGTGGTGATCAAAACGGGAATGACCTATACACAAAAGGTGCTTTATTCAATAAAGGATACTTAGAATTTTACGGCAACAATATCGCAGCGAATACTTCAAGATCTATTAATATGTTGAAGAGTATCTTTGCCGGAACTCCTTGGGGTACACAAGTTTATGCAGAAAGAACATCTGATGGATTCATAAATCAAGTTTTCCAAGTTTCAGCAAACTTTGGCACTGCTGGCAGCAAAGATGACACTAATAACTCTTGGTTTGTTATGCGTCATGACGGTTTGTTCTCTATACCCGGCAATATAAATGTTAACGGTGCACAAGAATCATTTTTTGCCGGAGATATTAGTGCAAACAACGTTAAAATTCGTTCTGATAGAACAGTTAAAAAGAACATTAAATCTATTGATAATGCATTAGATAAAATAATGGGCTTGGATGGATCTACATATCTTGATGAACATAATAACGTATCAGCTGGTCTGATGGCGCAGGACGTCCAAGAGGTGCTTCCAGAAGCTGTGACTGAAGATACTAGTGGTCTTTTACGTTTGAACTATAACGCCGTTATAGGGCTCCTAGTGAATGCTGTTAAAGAACTTCGTGAAGAAGTTAAACAACTGAGAGGTGAATAA

Tertiary structure

PDB ID
7d5b0171f37b9556a69b9563c58d52920c884ed140b8328ed42f5a046eb663e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50