Protein

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Genbank accession
URC25473.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MHLPNGSQIFIGVNMGEPISATDISNAKDPVFTVSNSQQIKKGAYVLIETSSWGKLVSRVLRVKEVSDNASVTLEGVDTTDQNVFPAGSNTATFREVKSWVEVPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEMETVSLSVSLKGRFTFLPSDVK
Physico‐chemical
properties
protein length:220 AA
molecular weight: 24441,17460 Da
isoelectric point:4,67975
aromaticity:0,09091
hydropathy:-0,30727

Domains

Domains [InterPro]
IPR014918
51–215
IPR014918
URC25473.1
1 220
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC125
[NCBI] 		2936944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URC25473.1 [NCBI]
Genbank nucleotide accession
ON185586.1 [NCBI]
CDS location
range 9733 -> 10395
strand +
CDS
ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAATATGGGTGAGCCAATTAGCGCTACTGATATTTCAAACGCTAAAGATCCGGTTTTTACTGTTAGTAATTCACAGCAGATCAAAAAAGGTGCTTATGTTCTGATTGAAACGTCTTCCTGGGGTAAACTGGTTAGTCGTGTGTTGCGGGTAAAAGAAGTATCTGATAACGCAAGCGTAACTCTTGAAGGTGTAGACACAACCGATCAAAACGTATTTCCGGCTGGTTCTAATACAGCAACTTTCCGAGAGGTGAAATCTTGGGTAGAGGTTCCTTGCGTACAGGATCTTGCGCAGGACGGCGGCGAGCAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAGGAACAGCAGTTGCCGACCTACAAGAGCGCCGTTTCTCTTACCTATACTTTCGCGCATGAATATGATAATCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTAACCGCTTTGCGTATGTACGTGCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTATTGTCTTTTAATGACATTCCGCAAACAACTATGAACGAAATGGAAACTGTTTCCCTTTCTGTATCTCTGAAAGGCCGATTCACGTTCTTACCTTCCGACGTTAAGTAA

Tertiary structure

PDB ID
dd74d995f32c81963b481f8fe5ccd26c418707c374927ae01d9ee9f9947e792b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9424
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank