Protein

View in Explore
Genbank accession
YP_010742862.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTPNVNLPDMPSDSFQPSVPFNEAMQTIDALLPLAVQSMALTAPPATVAGDAGKRWIPAAAPTGAWAGHAGDVALCTGADLWVFIEPPPYIVAYNIATGTEFRNIAGTWTAVP
Physico‐chemical
properties
protein length:114 AA
molecular weight: 11864,37690 Da
isoelectric point:4,12000
aromaticity:0,08772
hydropathy:0,22895

Domains

Domains [InterPro]
IPR021251
23–110
IPR021251
YP_010742862.1
1 114
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Langgrundblatt1
[NCBI] 		2939128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010742862.1 [NCBI]
Genbank nucleotide accession
NC_073093.1 [NCBI]
CDS location
range 29814 -> 30158
strand +
CDS
ATGTCAACGCCAAACGTAAACCTTCCCGATATGCCATCGGATAGCTTTCAACCGTCTGTGCCGTTCAACGAAGCGATGCAGACCATTGACGCGCTGTTGCCCTTGGCCGTGCAATCAATGGCCCTGACGGCTCCCCCGGCGACCGTGGCGGGCGACGCGGGCAAGCGCTGGATACCGGCCGCCGCCCCAACCGGCGCATGGGCAGGGCACGCGGGCGACGTGGCCCTTTGCACCGGGGCTGACTTGTGGGTATTCATCGAACCGCCGCCGTATATCGTTGCGTACAACATTGCGACGGGAACTGAATTCCGCAACATCGCCGGGACTTGGACGGCCGTTCCTTAA

Tertiary structure

PDB ID
b6208e4499ea87d730af8e116d0eb70688eda0c8c82901b1798468492caf1794
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8475
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of novel Xanthomonas phages for the plant pathogens X. translucens and X. campestris Erdrich,S.H., Sharma,V., Schurr,U., Arsova,B. and Frunzke,J. 2022 — GenBank