Protein

View in Explore
Genbank accession
AVI03135.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRVMEVSGVQVFLAYRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDSRPTSVVDPDSLGAPKYLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSSLASASLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNAITDTILDEIMDSEAMKELHDSAQDSAAKLNDYANSIIQNALANDADVRIMKKENGKRKAEIKHAEVLIANETEARVQQVNQISAEFNENLNAGLTQVNEALANETEARVTSEEALSAMIGQNSAALDQKLDSWADVNGVGSMYTMKLGLKYNGQEYNSGMALQLSASGGGVVSQVLFIADRFAIIRNAESGSYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGQQGWMINKNGSSEFSEVTVRGTIYATDGWFKGTVYAEHIEGDVMIAESNTIPFKTYSDIDSGDYEILKIHGENFDRSIDTNLIIQVNSTFRNTFRVIVQTPGKGEIEFYSIDTGNDGGTRAYALRGFDLPAAGRGQENRIIVRVTQSGRGSSIKTFTPWVERDDGTTGKESSDGFISNTGFIRERAYIAAYRKGSRIVV
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 139046,91590 Da
isoelectric point:4,82520
aromaticity:0,09713
hydropathy:-0,30772

Domains

Domains [InterPro]
IPR053171
3–876
IPR053171 Coil IPR015406
IPR055385
90–217
IPR055385 IPR032876 IPR013783
IPR036116
644–714
IPR036116
AVI03135.1
1 1256
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage JY917
[NCBI] 		2099585 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVI03135.1 [NCBI]
Genbank nucleotide accession
MG894052.1 [NCBI]
CDS location
range 17810 -> 21580
strand -
CDS
ATGACTAATATCAAGGCCCGCAAGGGTGGTTCAAGCAAGCCACGTACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTATTGCTTGCTGTTTCGGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATCCAGGGCTTCAGCGAGTCAAGCGCTGAGTTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTGCTAACTCAAAAAGATAACGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCTCAGGTGCTTATCCGCGTTAGTCGAGTAACGCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCAACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGCAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTCAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGACAAGTGGTCGCTGTATGAGGTGGCGCAATATTGTGATGAACTTGTTCCTGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTGGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCATTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTATCGATCATCGTCGATAAGCCGCGCGATCCTGTGTACCTGTTTACGGCTGATAACGTCGTTGATGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTATACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATGTTGAACCAGTATTCAACCCTGACGCAGCCATGCGGTTCGGCCACAACCCGACCAGCATTACAGCAATCGGATGTACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCCACAACCGTTTCGTTTTCTACTGGTCTGGAAGGTATGATTCCTTCTTGCGGCGATGTGATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTATCAGGCCGCGTTATGGAAGTGTCTGGCGTGCAGGTGTTCCTGGCCTACCGCTGCGACGCGAAGGCTGGCGATACTCTGATCCTGAATACCGACGACGGCAAGCCTGTGCGCCGCACAATCGCCAGCGTTTCGGCGGATGGTAAAACCCTCACGCTAAATGTTGGGTATAACTTTGACGTTGCGCCTGACAGTGTATTCCTGATTGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGTATTGAAAAGGGTAGTGATGACGACGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAACAAGTATGACGCGATCGACAACGGGGTAATTACCGATAGCCGACCAACTTCGGTTGTAGACCCGGATTCATTGGGCGCTCCGAAATACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGGATGAGCGTCGAAACGATGGTGATCGGCTGGTCTGCTGTACAGTATGCCAAACTGTACGAGGTGCAATGGCGCAAAGATGGCGGTAACTGGAACAACGTTCCTCGCACTGCGACAACGCAGGTTGATATTGAAGGCATCTATGCTGGCGAGTATCAGGCCCGCGTTAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTTCTTTGGCTAGTGCATCGCTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCTGACAACGAGATCTTCGGCATTCGCGTTAAGTGGGCCATGCCAGAAGGGGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGACGCAAGCCTGCTTACACTGATTCCTTACCCGGCGGCTGAATACTGGCACTCAATTCTGCCAGCTGGCTACGTGAACTTCTACAAAGCCAGAAGCGTAGACCGGATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGCATGTCGTCTACTGACGTTAACGCCATCACGGATACGATCCTGGATGAAATCATGGACAGCGAAGCAATGAAGGAGCTTCATGATAGTGCTCAGGATAGCGCGGCAAAACTCAATGACTACGCGAACAGTATCATTCAAAATGCGCTGGCGAATGATGCGGACGTTAGAATAATGAAAAAGGAGAATGGAAAGAGGAAAGCTGAAATTAAACACGCAGAAGTTCTCATCGCAAATGAGACGGAAGCCAGGGTGCAGCAGGTTAATCAGATCTCGGCAGAGTTCAACGAAAACCTCAATGCTGGATTAACTCAAGTTAACGAGGCACTAGCCAATGAAACTGAGGCACGCGTTACTTCTGAGGAGGCTCTATCAGCAATGATTGGACAGAACTCCGCAGCGCTAGATCAGAAACTCGACTCTTGGGCTGACGTTAATGGAGTTGGCTCCATGTACACAATGAAACTTGGACTGAAGTACAACGGGCAGGAATACAATTCCGGGATGGCCCTACAGCTTTCAGCTAGTGGTGGAGGCGTTGTTTCGCAAGTGCTGTTTATTGCTGATAGATTCGCCATCATCAGAAATGCTGAGTCTGGATCGTACACGTTGCCTTTTGTTGTGCAGAATGACCAGGTTTTCATGAATAACGCGCTTATTCAGGATGGTTCGATTACCAACGCGAAGATCGGCAACGTAATTCAGTCCAACAACTACATCGCAGGTCAGCAAGGGTGGATGATTAACAAGAATGGTAGTTCTGAGTTCAGCGAGGTAACAGTAAGAGGGACAATCTACGCAACTGATGGTTGGTTTAAGGGTACTGTTTATGCAGAGCATATTGAAGGTGACGTGATGATCGCAGAGTCAAACACGATACCGTTCAAGACATATTCCGATATTGATAGCGGAGATTATGAAATACTGAAAATTCATGGCGAAAACTTTGATAGGAGTATCGATACGAACCTGATTATCCAAGTGAATTCTACATTCAGGAATACTTTTAGAGTAATTGTTCAGACTCCAGGGAAGGGAGAAATAGAATTCTACAGTATAGATACTGGAAATGACGGAGGTACAAGAGCCTACGCGCTACGTGGCTTCGATTTGCCAGCAGCGGGAAGAGGGCAAGAGAATAGGATCATCGTTAGGGTAACTCAAAGCGGGAGGGGTAGCAGCATAAAAACATTCACTCCATGGGTTGAGAGAGATGATGGAACCACTGGAAAAGAAAGTTCTGATGGATTCATATCTAACACTGGTTTTATCAGGGAGAGGGCATATATAGCAGCATACAGGAAAGGAAGTAGGATTGTAGTCTAA

Tertiary structure

PDB ID
f1a7a13041a6bcc81e6380bb8ec37ab3509c9cb13cb45201465cca23c3ae71f7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7392
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Preliminary research on isolation and biological characteristics of a lytic bacteriophage against Klebsiella Pneumoniae Hao,Y., Li,J., Shi,H. and Sun,Y. 2024-12 — GenBank