Protein

View in Explore
Genbank accession
AUS02992.1 [GenBank]
Protein name
pectin lyase fold protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTKVNNRMIDGAAVNVLDFGADPKGVSDSTTAFQSAIDSINGGKLIVPEGTYYISSTIQLRHKNITIVGYGHEYSIINNTNDTEYAFDLFPVAAQTGTVGVESLGIVSKFGIKTRYDHSTDWENNSNPIKNIRIRDCKFTGKYDDISDSDAGTPAVTDVSVLDNYGVGLQLSVTYRSDIRNNEFYRYGVGINDSGNTLGIICQNRFLKCARHIHSQRTLWAGSSFGLGAEMVIEQNDFLDATHGGGVSMFNTFGCNFRNNYMEHLDRSGSDSSPVLMYSQNASH
Physico‐chemical
properties
protein length:285 AA
molecular weight: 31282,27530 Da
isoelectric point:5,42422
aromaticity:0,09825
hydropathy:-0,34667

Domains

Domains [InterPro]
IPR011050
13–267
IPR011050
IPR012334
14–283
IPR012334
IPR024535
15–211
IPR024535
AUS02992.1
1 285
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02992.1 [NCBI]
Genbank nucleotide accession
MG592671 [NCBI]
CDS location
range 258474 -> 259331
strand -
CDS
ATGACTACTAAAGTAAATAATCGAATGATTGATGGAGCTGCTGTCAATGTTTTAGATTTCGGTGCTGATCCTAAAGGAGTATCTGATAGCACTACAGCTTTTCAATCAGCAATTGATTCCATTAATGGGGGTAAGTTGATTGTGCCGGAGGGGACCTATTACATCAGCTCTACTATACAACTTCGCCATAAAAACATTACTATTGTAGGGTATGGTCACGAGTATTCAATCATCAACAACACAAACGATACTGAATACGCTTTTGATCTGTTTCCTGTCGCGGCGCAGACAGGTACAGTTGGGGTCGAGTCTCTTGGAATCGTTTCGAAATTCGGCATCAAGACTCGTTACGACCACAGCACAGATTGGGAAAATAACTCCAACCCTATTAAAAACATTCGAATACGAGACTGTAAGTTCACAGGCAAATATGATGATATTTCAGATTCAGATGCAGGCACACCTGCAGTTACCGATGTCTCTGTTTTAGATAATTACGGGGTTGGTTTGCAACTATCAGTTACCTATCGATCAGATATACGCAATAACGAGTTTTACAGATATGGTGTTGGAATCAATGACTCAGGAAACACTCTAGGGATCATCTGTCAGAATCGTTTCCTTAAATGCGCTAGGCATATACATAGCCAAAGAACACTTTGGGCTGGAAGTTCATTTGGTTTAGGCGCGGAAATGGTTATAGAACAGAATGATTTTCTTGATGCTACTCATGGCGGCGGTGTGTCTATGTTCAATACATTCGGGTGCAATTTTAGAAATAACTACATGGAACACCTAGATCGCTCAGGATCTGATTCAAGCCCTGTGTTAATGTATTCACAAAACGCGTCTCATTGA

Tertiary structure

PDB ID
957f773b2eab412b3f7ac2ac70cd0dd8fe74b216ff9f7e213b58849ef75e9a98
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8413
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank