Protein

View in Explore
Genbank accession
CAB4184758.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSDVEVTIQDDPIGVTVSNSPGPPGASSFFRGMASVWPPSSSPTAGSIWTLPDPVPTGTPAGYSAGYGAQWDGAAWVNIGPVRGPAGPAGPQGPAGSAGVPGVAGSAGTAGATGAAGAAGTAATVSVGSVSTGAAGTSAAVVNAGTATAAVLNFTIPQGAAGAAGSAGATGAAGADGTAATVSVGTVTTGAAGSSASVTNVGTSSAAVFNLSIPRGDTGAAGSAGATGAQGPQGIQGATGAAGAAGATGATGSAGATGSSGVISVSAPLANSGTSTAAVLGISTGTSSVTVCVGNDSRLSDTRTPTDGTVTDAKIVSTGLSTSVLNWAAIAAWAASTAYSKGDLVEYLGVAYRRSVAGTSGATFAATNWQQITPSAVITHTHSASDISSGTLATARLATGTASSSTYLRGDQTWASVTASLPAATTTTLGGVIVPASGGISVDGSGNATLAPQIYDFRTGSGPASATDGGTVSGSIGGSVRSWTWSVPANATTILIEAISGGAGGASGRVDAAGTARYGGGGGASGGRDVYTISCADLPSRSLTIRVPFGGAGGARAGTGISNGNNGSTAGDVSVKLGSTVYLFGATNTGAAAGGTASAGGGGAGAQMQWIGCAGGSSSVTATAAGGAHGNSPTCGTPGAGAGGGISSANVAYAGGVSGYRYEQYPGNSGASGGANTGGAGAAGSTCLWSGCGAIGASGGGGGANLTGDGGAGGNGSFPGGAGGGGGAAVSGYYSGAGGNGADGLVRITVFYT
Physico‐chemical
properties
protein length:753 AA
molecular weight: 68919,81980 Da
isoelectric point:5,14668
aromaticity:0,05179
hydropathy:0,16760

Domains

Domains [InterPro]
IPR050149
21–259
IPR050149 G3DSA:2.10.10.20
IPR008160
215–261
IPR008160
CAB4184758.1
1 753
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4184758.1 [NCBI]
Genbank nucleotide accession
LR797064 [NCBI]
CDS location
range 20825 -> 23086
strand -
CDS
GTGAGTGACGTTGAAGTAACAATCCAAGACGATCCGATTGGCGTGACGGTAAGCAATTCCCCCGGTCCGCCTGGGGCGTCGTCATTCTTTCGGGGAATGGCGTCGGTCTGGCCGCCATCGTCTTCCCCCACGGCCGGCTCTATCTGGACGCTTCCCGATCCGGTTCCGACTGGTACCCCCGCGGGCTATTCGGCCGGCTACGGAGCCCAGTGGGACGGAGCGGCGTGGGTCAACATTGGTCCAGTGCGCGGGCCCGCGGGTCCGGCAGGCCCCCAGGGCCCGGCAGGCTCTGCCGGTGTCCCTGGTGTGGCCGGCTCCGCGGGTACGGCCGGAGCGACCGGGGCGGCTGGAGCGGCCGGTACAGCGGCGACGGTTTCCGTTGGATCTGTGTCCACCGGCGCGGCCGGAACGTCGGCGGCGGTGGTCAATGCCGGAACGGCAACCGCGGCGGTTCTCAATTTCACGATTCCTCAGGGGGCCGCTGGGGCGGCTGGTTCGGCTGGGGCCACGGGCGCGGCTGGTGCGGATGGGACCGCTGCTACCGTGTCTGTCGGCACCGTGACCACCGGCGCGGCCGGATCCTCTGCGAGCGTTACCAACGTCGGCACCAGTTCGGCCGCGGTTTTCAATCTCTCGATACCTCGAGGCGATACAGGCGCGGCTGGTTCGGCTGGGGCCACGGGCGCGCAGGGACCGCAGGGGATCCAGGGGGCCACCGGGGCCGCAGGGGCCGCAGGGGCCACCGGGGCCACCGGCTCCGCAGGTGCCACCGGATCGTCTGGTGTGATCTCCGTTTCTGCACCGTTGGCAAACAGCGGCACTAGCACGGCTGCGGTGCTGGGGATCAGTACGGGCACCAGTTCGGTGACGGTGTGCGTCGGCAACGACTCCCGGCTTTCCGATACCCGCACTCCGACTGATGGCACTGTTACCGATGCCAAGATCGTTTCTACCGGGCTCTCGACCAGCGTTTTGAACTGGGCTGCGATCGCGGCCTGGGCGGCGTCCACCGCGTATTCCAAGGGTGATTTGGTCGAGTACCTCGGTGTGGCGTATCGGCGTTCCGTGGCCGGCACCAGCGGTGCTACGTTCGCGGCAACCAACTGGCAACAGATCACCCCATCGGCGGTCATCACACACACTCATTCCGCGAGCGACATTTCAAGTGGCACTCTTGCCACGGCCAGACTTGCCACGGGCACGGCATCATCGTCTACCTATCTGCGTGGCGACCAAACGTGGGCTTCGGTGACCGCGTCCCTCCCCGCCGCAACGACGACGACTCTGGGCGGGGTGATCGTGCCGGCATCTGGCGGGATCTCCGTGGACGGCAGCGGCAACGCTACGCTCGCGCCGCAGATATATGATTTTCGCACGGGGTCGGGCCCAGCGTCTGCCACGGACGGCGGCACGGTAAGCGGGTCAATCGGTGGCTCTGTCCGATCATGGACGTGGTCGGTTCCGGCGAATGCAACAACGATTTTAATCGAGGCGATCAGCGGCGGCGCTGGTGGTGCCAGCGGGCGCGTCGATGCTGCCGGTACGGCTCGATACGGTGGAGGTGGCGGCGCTTCTGGCGGTCGAGACGTCTACACGATTTCCTGCGCCGACCTCCCTTCGCGGTCACTGACTATCCGCGTGCCGTTCGGCGGTGCTGGCGGCGCTCGGGCTGGCACTGGGATATCCAACGGGAACAACGGCTCCACGGCCGGTGACGTGTCTGTGAAACTAGGCTCCACGGTCTATCTGTTTGGCGCAACGAACACCGGAGCCGCCGCCGGTGGCACCGCTTCGGCGGGGGGTGGGGGCGCTGGTGCACAAATGCAGTGGATTGGATGTGCCGGCGGCTCATCGTCTGTTACTGCGACGGCAGCAGGGGGCGCGCACGGCAATTCGCCAACGTGTGGCACTCCCGGCGCTGGCGCTGGAGGAGGAATTAGTTCCGCAAACGTCGCTTATGCAGGTGGTGTGTCCGGGTATCGATACGAGCAGTACCCAGGAAATTCTGGTGCATCGGGTGGCGCTAACACTGGAGGCGCTGGCGCTGCCGGATCGACGTGCCTCTGGTCCGGTTGCGGGGCAATCGGCGCATCTGGCGGAGGAGGAGGTGCCAACCTGACCGGCGACGGTGGCGCGGGAGGTAATGGCTCATTCCCAGGTGGTGCTGGAGGCGGTGGCGGGGCTGCCGTGAGTGGGTACTATTCCGGCGCGGGCGGTAATGGCGCTGATGGTCTGGTCAGAATCACGGTCTTCTACACATAA

Tertiary structure

PDB ID
15dfead45e0cadb083a15259dc633ac0638bf5e42e841f975583de4f35909bf7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50