Protein

View in Explore
Genbank accession
DBA08831.1 [GenBank]
Protein name
phage tail tip, host specificity protein J
RBP type
TF
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MGAVHQHLTGRKGGSSKPKQPVEAPDSLRSVAMAKILLAVGEGEFAGVPSERDIYLDNTPLMDPSGNLNFPNVKWEWRAGSVDQDYIPGIPAVENETSVNIELRSDTPWVRSLSNTQLSAVRLRFAWPALQQQDTNGNIGGYRIEYAVDLATDGGAYQEVLREAVDGKTTTRYERSRRIDLPAATNGWQLRVRRLTPNQNNNRIADTMLVAGYTEVIDAKLRYPNTALLYVEFSAEQFSNIPAVTVDCRGRKVQVPSNYDPETRAYLGIWDGTMKQAWTDNPVWHTYDIVTNDRFGVGKRIKAWMVDRWEMYRISQYCDQLVPDGKGGQEPRHTCNLNLQSRAGAWELLRDLTAIYRGMAYWAQGQLKIQADIPRATDVDFAYTRANVIDGRFSYGSASERTRYSRALVSYDNPANNYDTDVAAATDKRLQRRYGDNPVEVAAIGCTRESEAQRRGKWAILTNSQDRTITFRTGMDGAIPLPGWVIPVADALLAGREIGGRISAVAGRVITLDRDTQAKSGDRLFLNLPSGKAEARTVQSVAGRTVTVTTAYSETPLPELVWTLDADDLAVPLYRVMKVSQPERGVFEITALQYEPGKFSAIDTGAKLESRPISVIPITTVAPPASVTLTSHYQFDQGLAVSTMTIAWPAVEGAVAYDVEWKKDSGNWIRLPRAGTTSVDVTGIYAGGYLARVRAVSAFDITSVWKSSILTQLSGKTGAPPAVAYLRTQSRVFGIGLEWGFPAGAEDTQRTEIWYGTTTDREQAKKLGDFAFPQAAHEMQGLAAGVSFFFWARLIDRTGNIGAWYPAGAGTNGQSSSDQTEYDRYFSDRISESALNQGLKDKIGEIDDLSEKVTDLLNNSTAYDPAKIYSKGDVVYHNGRLYQWSSNTSGNIAPPSEAYWTDIGQISAEVGALAARVEQNTTNIGVIDGKLTAQAESINGLVAQVTPDAAGDTDWGAGDSNVYAGTVTVQSVSADADLATAIRVDSVKVSVDANAAAIVTEQQARASADNALASNIQALSATVGSNTAAIQQVSQAQTSTDGQLSAMWAVKMQVTAGGQYVAAGIGLGIENEAGVFQSQFLVDVNRFAVVNTANGQLTAPFVIQNGQTFISQALIGTGWITNAMIGNVIQSTALGANGEPLWKLDKAGSLTMNSATSGGFMRQTAEAVKVYDANLVLRVQIGNLDA
Physico‐chemical
properties
protein length:1186 AA
molecular weight: 128554,17490 Da
isoelectric point:5,22910
aromaticity:0,08347
hydropathy:-0,27159

Domains

Domains [InterPro]
IPR053171
5–1022
IPR053171 IPR015406
IPR055385
93–219
IPR055385 IPR032876 Coil IPR003610
G3DSA:2.10.10.20
845–907
G3DSA:2.10.10.20
IPR036573
857–906
IPR036573
DBA08831.1
1 1186
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS-D14P
[NCBI] 		2969644 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA08831.1 [NCBI]
Genbank nucleotide accession
BK061589 [NCBI]
CDS location
range 2245 -> 5805
strand -
CDS
ATGGGCGCAGTTCACCAGCACCTGACCGGCCGCAAGGGCGGCAGTAGCAAGCCGAAACAGCCGGTCGAGGCACCCGACAGCCTGCGCTCGGTCGCGATGGCCAAGATCCTGCTCGCCGTGGGCGAGGGCGAGTTCGCCGGCGTTCCGAGCGAGCGCGATATCTACCTCGACAACACCCCGCTGATGGATCCGAGCGGTAACCTGAATTTCCCCAACGTTAAGTGGGAGTGGCGCGCGGGGTCGGTGGACCAGGACTACATCCCAGGCATCCCTGCCGTTGAGAACGAAACCAGCGTCAACATCGAGTTGCGCAGCGATACGCCCTGGGTGCGCTCGCTGAGCAATACCCAGCTTTCCGCAGTGCGCCTGCGCTTCGCCTGGCCAGCGCTCCAGCAGCAGGACACCAACGGCAACATCGGCGGGTACCGGATCGAATATGCCGTAGATCTGGCCACCGACGGCGGCGCCTATCAGGAGGTGCTGCGCGAGGCCGTCGATGGCAAGACCACCACCCGCTACGAGCGCTCCCGCCGGATCGACCTGCCGGCGGCCACCAATGGCTGGCAGTTGCGCGTCCGCCGCCTGACGCCGAACCAGAACAACAACCGCATCGCCGACACCATGCTGGTCGCCGGCTACACCGAGGTGATCGACGCGAAGCTGCGCTACCCGAACACGGCCCTGCTGTATGTCGAGTTCAGCGCAGAGCAGTTCAGCAACATTCCGGCTGTCACAGTCGACTGCCGCGGGCGGAAGGTCCAGGTGCCGAGCAATTATGATCCGGAGACCCGTGCCTACCTCGGTATCTGGGACGGCACGATGAAACAGGCCTGGACCGATAACCCGGTCTGGCACACCTACGACATCGTGACCAACGATCGCTTCGGTGTGGGTAAACGCATCAAGGCCTGGATGGTAGACCGTTGGGAGATGTACCGGATTTCCCAGTATTGCGACCAATTGGTGCCGGACGGGAAGGGCGGCCAGGAGCCGCGACACACCTGCAACCTGAACCTGCAAAGCCGCGCCGGGGCCTGGGAGCTGCTGCGTGACCTCACCGCGATCTACCGCGGTATGGCGTACTGGGCCCAGGGCCAACTGAAGATCCAGGCGGATATCCCGCGCGCCACCGACGTCGATTTCGCCTACACCCGGGCCAATGTCATCGACGGCCGCTTCAGCTACGGCTCTGCCAGTGAGCGTACTCGGTACAGCCGCGCCTTGGTCAGCTACGACAATCCGGCGAACAACTACGACACCGACGTGGCTGCGGCCACCGATAAGCGCCTGCAGCGGCGTTACGGCGACAACCCGGTCGAGGTGGCAGCCATCGGCTGCACTCGCGAGAGTGAGGCCCAGCGGCGCGGAAAGTGGGCGATCCTGACCAACAGCCAGGATCGCACGATAACGTTCCGTACTGGGATGGACGGAGCAATTCCGCTGCCGGGATGGGTGATTCCGGTGGCTGACGCGCTGCTGGCTGGACGGGAGATCGGCGGGAGGATCTCTGCGGTCGCTGGCCGAGTGATCACCTTGGATCGCGATACCCAGGCAAAGTCTGGCGACCGGCTGTTCCTGAACCTGCCCAGCGGTAAGGCTGAGGCGCGAACCGTGCAGTCGGTTGCCGGGCGCACGGTGACCGTGACGACAGCCTACAGCGAGACCCCGCTACCGGAATTGGTCTGGACCCTCGATGCCGACGACCTGGCGGTGCCGCTCTACCGTGTGATGAAAGTCAGTCAGCCGGAGCGGGGTGTCTTCGAGATCACCGCTCTGCAGTACGAGCCCGGGAAGTTCTCAGCGATCGACACTGGTGCCAAGTTGGAGAGCCGGCCGATCAGCGTTATCCCGATCACCACAGTTGCGCCGCCGGCGAGCGTCACGCTGACCTCGCACTACCAGTTCGATCAGGGATTGGCGGTCAGCACGATGACCATTGCCTGGCCTGCTGTAGAAGGGGCGGTGGCATACGACGTCGAGTGGAAGAAGGACAGCGGCAACTGGATCCGCCTGCCGCGTGCCGGCACCACCAGCGTCGATGTGACCGGCATCTACGCAGGTGGCTATCTGGCGCGGGTGCGCGCGGTGTCGGCCTTCGACATCACGTCGGTCTGGAAGAGCTCGATCCTGACCCAACTCAGCGGCAAGACCGGCGCGCCGCCGGCGGTTGCCTATCTCCGCACGCAATCGCGGGTGTTCGGCATCGGTCTGGAGTGGGGCTTCCCTGCTGGCGCCGAGGATACCCAGCGCACGGAAATATGGTACGGCACCACCACTGATCGAGAGCAGGCGAAGAAACTGGGCGACTTCGCTTTCCCACAGGCGGCCCATGAAATGCAGGGGCTGGCGGCTGGCGTGTCGTTCTTCTTCTGGGCACGCTTGATAGATCGCACTGGCAACATAGGGGCGTGGTATCCGGCTGGCGCTGGGACCAATGGCCAATCAAGCAGCGACCAGACGGAATACGACCGGTATTTTTCTGATCGCATCAGCGAAAGCGCGCTGAACCAAGGGCTGAAGGACAAAATCGGCGAGATCGATGATTTGAGCGAGAAGGTTACCGATCTGCTCAACAACTCGACCGCGTATGACCCGGCAAAAATCTACTCGAAAGGGGATGTTGTCTATCACAATGGTCGCCTCTACCAGTGGAGCAGCAATACCTCTGGCAACATCGCACCGCCGAGCGAAGCATACTGGACTGACATCGGCCAGATCTCGGCAGAGGTGGGCGCTCTGGCTGCTCGGGTCGAACAGAACACCACCAACATCGGTGTGATCGACGGCAAGCTTACTGCGCAGGCAGAGAGCATTAACGGCCTGGTCGCCCAGGTGACACCCGATGCTGCCGGAGATACGGACTGGGGCGCCGGAGATAGCAATGTCTATGCGGGAACAGTAACGGTTCAGTCGGTCTCGGCTGACGCCGACCTTGCAACTGCAATCCGCGTGGACTCTGTGAAGGTTTCGGTTGACGCAAACGCAGCAGCCATCGTTACGGAACAACAGGCGCGCGCCTCCGCCGATAACGCCCTGGCTTCGAATATCCAGGCGCTCAGCGCTACTGTCGGAAGCAACACTGCTGCCATCCAACAGGTCAGCCAAGCGCAAACCAGCACCGATGGCCAACTGTCAGCGATGTGGGCGGTGAAGATGCAGGTCACGGCAGGCGGTCAGTACGTTGCAGCTGGTATCGGCTTGGGTATCGAAAACGAGGCTGGTGTCTTCCAGTCGCAGTTCCTTGTTGATGTGAATCGCTTTGCAGTCGTGAATACCGCCAACGGACAGTTGACTGCTCCGTTTGTGATACAGAACGGGCAGACCTTCATCAGTCAGGCGCTGATAGGAACTGGCTGGATCACCAACGCGATGATCGGCAACGTGATTCAGTCGACCGCACTCGGTGCCAACGGCGAGCCGCTGTGGAAGCTTGATAAAGCAGGGAGTTTGACGATGAACAGCGCGACATCCGGGGGCTTCATGAGGCAGACGGCGGAGGCCGTCAAGGTCTACGACGCGAACCTCGTGTTGCGGGTACAGATCGGGAATCTCGACGCATGA

Tertiary structure

PDB ID
241ff594bfdd66bbfc72de73affe768e2af2234fe1f2af797f33a4f5ba6e6591
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage identification and molecular analysis in the genomes of 53 Pseudomonas aeruginosa strains isolated from critical care patients Gonzalez de Aledo,M., Blasco,L., Lopez,M., Ortiz-Cartagena,C., Bleriot,I., Pacios,O., Hernandez-Garcia,M., Canton,R. and Tomas,M. 2023 — GenBank