Protein

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Genbank accession
XAL80159.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MFYSLMRESKIVIEYDGRGYHFDALSNYDASTSFQEFKTLRRTIHNRTNYADSIINAQDPSSISLAINFSTTLIESNFFDWMGFTREGNSLFLPRNTPNIEPIMFNMYIINYNNSCIYFENCYVSTVDFSLDKSVPILNVGIESGKFSEVSTFRDGYTITQGEVLPYSPPAVYTNSAPLPALISASMSFQQQCSWREDRSIFDINKVYTNKRAYVNEMNASATLAFYYVKRLVGDKFLNLDPETRTPLIIKNKYVSITFPLARISKRLNFSDLYQVEYDVIPTADSDPVEINFFGERK
Physico‐chemical
properties
protein length:298 AA
molecular weight: 34317,31210 Da
isoelectric point:5,23427
aromaticity:0,14430
hydropathy:-0,25738

Domains

Domains [InterPro]
IPR056389
1–297
IPR056389
XAL80159.1
1 298
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SCF
[NCBI] 		3143147 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAL80159.1 [NCBI]
Genbank nucleotide accession
PP735124 [NCBI]
CDS location
range 8852 -> 9748
strand +
CDS
ATGTTTTATTCTCTCATGCGAGAGTCTAAAATAGTTATTGAGTACGATGGTAGGGGGTATCATTTCGATGCCCTCTCTAACTATGATGCTAGTACGTCTTTTCAAGAGTTTAAGACTCTTAGACGTACTATCCATAATCGTACTAACTATGCAGACTCTATTATTAATGCTCAAGATCCTTCATCTATTTCATTGGCAATAAATTTCAGTACTACGCTTATTGAGTCTAATTTCTTTGATTGGATGGGATTCACGCGTGAGGGGAATTCTTTATTTTTGCCAAGAAATACTCCCAATATTGAACCTATTATGTTCAATATGTATATTATTAATTATAATAATAGCTGTATTTATTTCGAAAACTGTTATGTATCAACAGTTGATTTTTCTCTAGATAAGAGTGTACCAATTCTAAATGTTGGTATTGAGTCTGGAAAATTCTCTGAAGTATCTACTTTCCGTGATGGATATACAATTACACAAGGTGAAGTACTTCCGTATAGTCCCCCAGCTGTGTATACTAATAGCGCGCCGCTGCCGGCATTAATTTCAGCATCTATGTCCTTCCAACAACAATGTTCTTGGAGAGAAGATAGAAGTATATTTGATATAAACAAAGTTTATACTAATAAACGAGCTTATGTCAATGAAATGAATGCTTCCGCAACGCTAGCTTTCTATTATGTTAAGAGATTGGTAGGAGATAAGTTCTTGAATCTAGATCCTGAAACAAGAACTCCCCTAATTATTAAAAATAAATATGTTTCTATAACATTCCCTTTAGCACGTATTTCAAAACGCCTAAACTTCTCAGATTTGTATCAGGTAGAGTATGATGTAATACCTACTGCTGATTCAGATCCTGTAGAAATAAACTTCTTTGGAGAAAGAAAATAA

Tertiary structure

PDB ID
f4058eadb21ad96da33ed7c759ff1b5f5e4bd78f94096471cf412e819679f311
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7897
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a lytic phage that eliminates Salmonella Enteritidis from contaminated fresh produce Dapuliga,C.C. and Schmidt,S. 2020-12 — GenBank