Protein

View in Explore
Genbank accession
URQ03109.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MKLMAELRSTTAIGGNIVWHGGNLRFDPQGETVLYSGYKLYTENDKPDPHTDLTESVVKRAGDVMSGDLQIAKSTAQLHLSSTANTDASLYLTEDNGNHGVRYHYDGVVNQWQIIRRESNSESVVMYGSRSNNNVVINGIGYLNTTQRIFADNYHPNADKWTTARTLTLSGEVTGSVSIDGSSNVTINTVVPNHTTYAEVGLSASNPEYIATGRTLSGVDTTVDWDTLYRGGFYNKLSQGLNRPSGFTGYWYAQTMTYGSTTNATQVAYPYGISGNSGTIALRTRYADVWEDWVYMYHTDYHPEADKWTTARTLTLSGDVSGSVSFDGSSNISLAVTVADDSHTHDGRYYTEAESDARFVNATGDTMTGYLNVPTTQAQSSNVVYGFGGTSGGKIGSMQLSSGDIDDYQRSGFIDVNSSITGKPAEETGWMWGVHTEHNNGNGYAMTLAMGQNSNRLWWKRRESGVSSAWMKIFDDEYHPLADKWTTARTLTLNGDVSGSASIDGSSNVTLSVVVANDSHTHDGRYYTETEADARFAPIAGGGYVQKTGDTMSSSLIITDSAGNTAPASETVKVDKFGLIGNRTAVYLHNSNTAGEIVLGVGGILADNKQFSVKSTSITSTVNITAPTFIGALSGNATTATSATSATQATKWTTARTLTIGKTGKSVNGTANVSWSPQEVTGTNGAGQISFGTNNRVTTAEFISLLSAKGAFSTWYWTCRGSWSYAAQVTVDTGFGVFGTAGSVIEVHGTSTTNCTIKVITPTTASGATTRREFIYIDNGSNYAPGWRANYNSSYHPLADKWTTARTLTLNGDVSGSASIDGSANVALSVAVADDSHNHTHSDGSFTVNGTLISTGVSSYDKIRVWSSGSYTIGMASAQSFGWLNDYAMTFTMNNDTDRGFLWRDSSDAATDGAMSLTTNGNLMVKNVIALGGDTTRYMQRSSNEGSWVFRSDNGKTWHFGHRNTSWLHNSTDATSGFYYYQSIQSAGNITAYSDARVKTNVERITNPLEKIDRLNGYTYDRTDVECPRQTGVIAQEVLEVLPEAVVESGGDADGHYAVAYGNMVGLLIEGIKEEKRKREALEERIARLEALLS
Physico‐chemical
properties
protein length:1094 AA
molecular weight: 117986,87460 Da
isoelectric point:5,38529
aromaticity:0,09506
hydropathy:-0,39936

Domains

Domains [InterPro]
IPR005601
61–190
IPR005601 cd19958 IPR030392
IPR030392
994–1046
IPR030392 Coil
URQ03109.1
1 1094
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PVA8
[NCBI] 		2938951 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ03109.1 [NCBI]
Genbank nucleotide accession
ON190024 [NCBI]
CDS location
range 62488 -> 65772
strand -
CDS
ATGAAACTAATGGCAGAATTACGTTCAACAACCGCGATTGGCGGTAACATAGTTTGGCATGGCGGTAATTTGCGTTTCGATCCGCAAGGAGAAACAGTACTTTACAGTGGCTACAAACTTTATACAGAAAATGACAAGCCAGACCCTCATACAGATTTAACCGAGTCTGTTGTTAAACGTGCTGGTGATGTCATGAGTGGCGATTTGCAAATCGCTAAATCGACTGCGCAATTGCATTTGAGCAGTACTGCAAACACCGATGCAAGTCTATACTTGACTGAGGACAACGGAAATCACGGGGTTCGTTATCACTATGATGGCGTTGTCAATCAATGGCAGATTATCAGACGTGAATCGAATTCTGAATCGGTTGTCATGTACGGTTCTAGATCAAACAACAACGTTGTTATCAACGGTATTGGTTATCTAAACACAACGCAGCGAATTTTTGCAGACAACTATCACCCAAATGCCGATAAATGGACGACTGCAAGAACGCTTACTCTATCAGGCGAAGTAACTGGTTCAGTTTCAATTGACGGTAGTTCAAACGTCACTATCAATACAGTTGTTCCAAATCATACAACATACGCTGAAGTTGGTCTGAGCGCAAGTAACCCTGAATATATCGCGACGGGGCGTACTCTATCGGGTGTTGATACCACAGTTGACTGGGATACTCTTTATCGAGGTGGCTTTTACAACAAGTTATCACAAGGTTTAAATCGACCTTCTGGGTTTACTGGTTACTGGTATGCTCAGACAATGACATATGGTTCGACTACTAACGCGACTCAAGTTGCTTACCCATATGGTATAAGCGGCAACTCAGGTACAATTGCACTTCGTACGAGATACGCAGACGTGTGGGAAGACTGGGTTTATATGTACCACACCGACTACCACCCAGAAGCTGATAAGTGGACAACTGCAAGAACGTTGACGTTATCTGGTGATGTTAGTGGATCAGTTTCGTTTGATGGTAGCTCGAATATTTCACTCGCAGTTACAGTTGCTGACGACTCTCATACTCACGATGGTCGTTACTACACCGAAGCAGAATCTGATGCTCGTTTCGTAAACGCGACTGGCGATACGATGACTGGTTACTTGAATGTACCTACTACACAAGCTCAGTCAAGTAACGTGGTTTACGGTTTTGGTGGAACATCTGGCGGCAAAATCGGCTCGATGCAGCTATCTTCTGGTGACATTGATGATTACCAACGAAGCGGTTTCATTGATGTAAATAGCTCAATCACGGGTAAGCCTGCTGAAGAAACTGGTTGGATGTGGGGTGTTCATACTGAGCACAACAACGGTAACGGTTATGCAATGACTCTTGCTATGGGTCAGAATAGTAATCGCCTATGGTGGAAGCGTCGAGAGTCTGGTGTTAGTTCAGCGTGGATGAAGATCTTCGATGATGAATATCACCCATTGGCTGATAAGTGGACAACTGCAAGAACATTGACTCTGAACGGCGATGTAAGTGGTTCTGCTTCAATCGACGGTAGCTCAAACGTTACCTTGTCTGTTGTGGTTGCTAATGACTCACATACGCACGATGGTCGATACTACACCGAGACTGAAGCAGACGCGAGATTCGCACCTATTGCGGGCGGCGGCTACGTACAGAAAACTGGTGATACGATGAGTTCATCATTGATCATCACTGACTCTGCTGGCAATACGGCTCCTGCATCTGAAACGGTTAAAGTTGATAAATTTGGATTGATTGGTAACCGCACTGCGGTGTATTTGCACAACTCAAACACGGCAGGTGAGATTGTTCTTGGCGTCGGTGGTATACTAGCTGACAATAAACAATTTTCAGTTAAGAGTACTTCAATTACATCGACTGTGAATATCACAGCACCGACATTCATCGGGGCATTGAGTGGTAACGCTACGACTGCAACATCTGCGACTTCAGCTACACAAGCGACGAAGTGGACGACTGCGAGAACGTTGACAATCGGGAAAACTGGCAAGTCTGTAAACGGTACAGCGAACGTATCATGGTCTCCTCAAGAGGTTACAGGCACTAACGGTGCAGGTCAAATTTCATTTGGGACAAATAATCGAGTAACGACTGCTGAATTTATTTCATTGCTGTCTGCAAAAGGCGCGTTTTCAACTTGGTACTGGACATGTCGTGGTAGTTGGTCATATGCTGCTCAGGTGACAGTAGACACGGGATTTGGTGTGTTTGGTACTGCGGGTTCTGTGATTGAAGTTCATGGTACTTCAACAACAAACTGCACAATCAAAGTTATTACACCGACAACTGCTTCTGGTGCGACAACTAGACGAGAATTCATTTACATTGATAATGGTTCTAATTATGCACCGGGATGGCGTGCTAACTACAACTCATCTTATCACCCGTTGGCAGATAAGTGGACTACGGCTCGTACTCTGACTCTGAACGGCGATGTAAGTGGTTCTGCTTCAATCGACGGTAGCGCAAACGTTGCATTATCTGTTGCGGTTGCGGATGATTCACACAATCATACTCATTCTGATGGGAGCTTCACAGTCAATGGGACATTGATCTCAACTGGTGTTTCTTCTTATGATAAGATTCGAGTGTGGTCTAGTGGTTCATATACAATCGGCATGGCAAGCGCACAATCCTTTGGTTGGTTGAATGACTACGCAATGACGTTCACAATGAACAACGATACGGATCGTGGATTCTTGTGGCGTGATTCGAGTGACGCAGCGACTGATGGGGCAATGTCATTAACGACAAACGGCAACTTGATGGTTAAGAACGTCATTGCATTGGGTGGCGATACTACACGATACATGCAGAGATCTTCAAATGAGGGTAGTTGGGTTTTCCGTTCTGATAATGGTAAAACGTGGCACTTTGGTCATCGAAACACAAGTTGGCTTCACAACTCAACTGATGCGACTAGCGGCTTCTACTACTATCAAAGCATTCAGTCGGCTGGTAATATTACAGCATACTCGGATGCGCGAGTCAAGACTAACGTTGAGCGAATCACAAATCCGCTTGAGAAAATTGACCGTCTGAATGGTTACACATATGATCGTACAGACGTTGAATGTCCGCGACAAACTGGTGTAATTGCTCAAGAAGTTCTTGAAGTTCTACCAGAAGCTGTTGTTGAATCCGGTGGCGATGCTGATGGTCACTATGCAGTTGCATACGGAAATATGGTTGGTCTATTGATTGAGGGTATTAAAGAAGAGAAGCGCAAACGCGAAGCTCTTGAAGAACGAATCGCTAGACTAGAAGCACTACTAAGTTAA

Tertiary structure

PDB ID
bb1bfe8fa1112835d3c0a22ee7d206a226389468fe09d8b74c4539d21d705080
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5473
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a broad-host-range bacteriophage that prevents Vibrio alginolyticus infections in juvenile turbots farming He,Z. 2023-05-12 — GenBank