Protein

View in Explore
Genbank accession
QBQ80950.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNSEQFALQASESAANAKKSELNAETSKNSAATDAASALLSKQESAASASSALQSKNAAAGSATSAQQALTAVQGLKAEVQQLKTDTQHIKEEGVAEVTALKNAATTSANNAKASETASANNATLADTKAKEASVSATTANQAKVAAEAAKAASEASAVESATSAGKSQTAANAAKASETVATQKAASASTSETNAAASAQTATNKAGESAASATAAKASETNAKTSETNAGTSAGRSESAALRSEAAAQRAEDIADAIGLEDATLTVKGIVRLSNDTNSTAENLAATPKAVKTVMDVANTKAPSNSPVLTGVPTAPTPAPEVNNNQIATTQFVHQIISALIGDAPDALNTLKELADALGDDPNFATTITTLINSKLAKDQNGADIPNKQLFIDNVGLRETVNLALGALKKNQNGADIPDKGVFLNNINAASKTDMAAKKGMRYTVVNAPAGVEAGKFYPVAIRRSSGFSSELASRVTISTGSRTGNHRLNNCEFNGFVMTGGWTDRGRYAYGMFHAYTANERAIHSILMSNKDDDLCSVFYVEGEAFPISVYVEEGLSVVAPSADYVVGQTTYKWGATDPGTECVAAETVLNFSNGRGFYSSHALLTNADISGNKIYANGEIVARGENQVRMIGGDYGALWRNDGAKTYLLFTAKGDQYGGWNDLRPFMIDNATGEFTIGTKLNAGQGVNGNASSATKLQTARKIGGASFDGTADVNLPGVNIQGNQNTTGNAATATKLQTARRIANVPFDGSGDISIPARNVNAFALGLTQIVQDPEDGNLSNGVPWNAITGVYRQQGIGASNIVAHFCDGGGSTPSLQIRAMYRNGGLWYRTSRDGYGFEENWDQIYTKKNPPPAGETLPVGVPLPWPTDTPPSGYIVMQGQPFDKAAYPKLAAAYPSGVLPDMRGQTIKGKPASGRDVLSTEADGVKSHTHTASTASVDLGSKTTSSFDYGTKGTSSFDYGTKTSNNTGAHTHGISGTANSAGGHQHHSSGPYANSSDSDLFPNGYTQVSVTNKPVVPRQGGAGMTRVSGKTSSDGAHTHSLSGSAASAGAHAHTVGIGAHTHSVGIGAHSHTVALGSHSHGVTVNATGNTENTVKNVAFNYIVRAA
Physico‐chemical
properties
protein length:1112 AA
molecular weight: 114402,35140 Da
isoelectric point:6,40902
aromaticity:0,05576
hydropathy:-0,36178

Domains

Domains [InterPro]
Coil
67–94
Coil IPR005068 IPR051934
IPR048390
610–672
IPR048390 IPR022246 SSF88874 SSF88874
IPR037053
862–914
IPR037053
IPR011083
866–913
IPR011083
QBQ80950.1
1 1112
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HdK1
[NCBI] 		2508190 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ80950.1 [NCBI]
Genbank nucleotide accession
MK373794 [NCBI]
CDS location
range 28213 -> 31551
strand +
CDS
GTGTCTAACTCTGAGCAATTTGCATTGCAGGCGTCTGAATCCGCTGCTAATGCTAAGAAGAGTGAGCTTAACGCAGAGACAAGTAAAAACTCTGCTGCAACGGATGCAGCGTCAGCTCTGCTGTCAAAACAGGAATCTGCTGCTAGTGCGTCTTCCGCATTGCAATCCAAGAACGCTGCGGCTGGTTCTGCTACATCAGCTCAACAAGCTCTTACTGCTGTGCAAGGACTCAAGGCTGAAGTCCAGCAATTAAAAACCGACACGCAGCATATTAAAGAAGAGGGTGTCGCTGAAGTAACAGCTCTCAAGAATGCTGCAACTACTTCGGCCAACAATGCTAAAGCATCAGAAACTGCATCTGCTAATAATGCGACTTTGGCTGATACTAAAGCAAAGGAAGCGTCTGTAAGTGCAACCACCGCTAATCAAGCGAAAGTAGCTGCTGAGGCAGCAAAGGCCGCATCCGAAGCAAGTGCAGTTGAGTCCGCTACTTCTGCCGGTAAATCGCAGACCGCAGCTAATGCAGCTAAGGCAAGTGAGACGGTTGCAACACAGAAGGCAGCTTCGGCGTCTACGTCTGAAACTAATGCGGCAGCTTCCGCTCAGACTGCGACTAACAAAGCTGGTGAGTCCGCCGCTAGTGCTACCGCAGCTAAGGCAAGCGAAACTAATGCTAAAACTTCAGAAACTAATGCTGGTACATCAGCTGGAAGATCTGAGTCTGCTGCTTTACGCTCAGAAGCTGCTGCCCAACGTGCGGAAGACATTGCTGATGCAATTGGTCTTGAAGATGCAACTTTAACTGTTAAAGGTATCGTTCGTCTTAGCAATGATACTAACAGCACTGCTGAAAACCTGGCAGCTACGCCAAAGGCTGTTAAAACAGTCATGGACGTTGCTAATACTAAAGCTCCGTCAAATAGTCCTGTTCTAACTGGCGTACCAACGGCACCAACTCCAGCACCTGAAGTTAATAACAATCAGATTGCCACAACTCAGTTTGTACACCAAATTATAAGCGCACTGATTGGTGATGCACCAGACGCGTTAAACACTCTGAAAGAGTTAGCTGACGCTCTTGGTGATGATCCGAATTTTGCAACGACGATAACCACACTTATTAACAGTAAGTTGGCTAAAGATCAAAATGGTGCTGACATTCCTAATAAGCAACTGTTCATTGATAACGTTGGTCTACGTGAGACTGTCAACTTAGCTCTCGGTGCATTGAAGAAGAACCAAAACGGTGCAGATATACCGGATAAAGGTGTCTTCCTTAATAACATCAATGCTGCCAGCAAGACGGATATGGCCGCCAAGAAAGGTATGAGATATACTGTGGTCAATGCCCCAGCGGGAGTTGAAGCAGGTAAGTTTTATCCTGTTGCGATTCGTCGTTCTTCTGGATTCAGCAGTGAATTAGCATCCAGGGTGACAATAAGTACAGGTTCAAGAACGGGAAACCATAGGTTGAACAACTGCGAGTTCAATGGTTTTGTTATGACTGGTGGTTGGACTGACAGGGGACGTTATGCTTATGGAATGTTCCACGCATATACTGCAAATGAACGTGCTATTCATTCCATTCTGATGAGTAATAAAGATGATGATCTGTGCTCTGTGTTCTATGTCGAAGGTGAAGCGTTCCCTATCTCTGTATATGTAGAAGAAGGTTTATCTGTTGTTGCACCATCTGCCGACTATGTTGTCGGACAAACGACTTACAAATGGGGTGCTACAGACCCTGGAACAGAATGCGTGGCCGCTGAAACTGTACTTAATTTCTCCAATGGTAGAGGATTCTATAGTTCGCACGCACTCCTCACAAATGCGGATATTAGTGGCAATAAAATTTACGCCAACGGTGAAATCGTAGCTCGCGGTGAGAATCAAGTTCGCATGATTGGTGGGGACTACGGTGCGTTATGGCGTAACGACGGTGCCAAGACCTATCTCTTATTTACCGCTAAAGGCGATCAATACGGTGGTTGGAACGATTTAAGACCATTTATGATTGATAACGCTACTGGTGAGTTTACCATCGGTACTAAATTGAACGCCGGTCAAGGTGTGAATGGTAACGCATCCAGTGCTACTAAGTTACAAACAGCGCGTAAAATTGGTGGCGCCTCATTTGATGGTACTGCTGACGTCAATCTTCCAGGCGTTAACATTCAGGGTAATCAGAACACAACTGGTAATGCGGCAACTGCCACCAAACTACAGACAGCACGTAGGATTGCCAATGTGCCTTTTGATGGTAGTGGCGATATATCGATTCCAGCTAGAAACGTGAATGCGTTTGCGTTAGGTTTGACTCAAATAGTACAAGATCCAGAAGATGGAAATCTATCTAATGGTGTACCTTGGAATGCTATAACCGGTGTTTACAGACAACAAGGTATAGGAGCCTCTAATATTGTTGCTCATTTTTGTGATGGTGGTGGTTCAACACCTTCTTTGCAGATAAGAGCTATGTATAGGAATGGTGGTCTTTGGTATCGTACATCACGTGATGGTTATGGTTTTGAAGAAAACTGGGATCAAATTTACACTAAAAAGAACCCGCCTCCGGCTGGCGAAACCTTACCTGTAGGTGTTCCATTACCGTGGCCCACGGATACACCTCCGTCCGGTTATATTGTAATGCAGGGTCAACCCTTCGATAAAGCTGCATACCCGAAACTTGCTGCTGCATACCCGTCGGGTGTACTTCCAGACATGCGTGGTCAAACTATCAAAGGTAAACCAGCAAGCGGTCGTGACGTACTTTCTACAGAAGCTGATGGTGTGAAATCACATACTCACACTGCGTCTACTGCATCTGTCGATCTTGGAAGCAAGACAACTTCTAGCTTTGATTATGGTACTAAAGGGACAAGTAGTTTCGACTACGGTACTAAGACGAGTAATAATACTGGTGCGCATACACATGGTATTAGCGGAACAGCAAATAGTGCAGGTGGGCACCAACACCATAGTTCTGGACCATATGCGAATTCTAGTGATAGTGATCTCTTTCCTAACGGTTATACCCAGGTTTCAGTCACAAACAAACCAGTTGTACCACGGCAAGGTGGCGCAGGTATGACCCGTGTATCAGGGAAGACATCATCAGATGGAGCACATACCCACTCGTTATCCGGTAGTGCCGCAAGCGCAGGTGCTCACGCACACACTGTTGGTATTGGTGCTCACACACACTCAGTCGGTATTGGTGCTCATAGTCATACAGTCGCTTTAGGTTCACACAGCCACGGTGTTACAGTTAACGCAACTGGTAACACGGAAAACACCGTTAAGAACGTTGCATTCAACTATATTGTGAGGGCTGCTTAA

Tertiary structure

PDB ID
69d9e087e6f4f439e6ab9578e664dadaca7d3afa808607a212cb4f4923fc7749
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank