Protein

View in Explore
Genbank accession
AIK68264.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MVNVTPISPIVPGDTSVGDSVAKANDVFSRIVEQGQAVNGLLIDVGDKASLQTSIKTNLVAAINEILVRFNDGFLVENITGLLADLDTTNKTNLVGAINEVVGDVGDLDALQSVNKSSIVAAINEILTENAGVGNLQNLSTIDKSNIVSAINELSLSIGSFSNLSGYQDIVSAINEISDDIGDRDELETTVKNNLVVAINEIVSKYELFVAKDGSTAFTGNVNLDNHKVINLAPGTNPNDAVTVAQIPELVKLGDVDSLSTSTKENAVLAINEVVGYIGQLNLLNTTVKTNIVAAINEIVANIDYQDMQTKLSGETLIKFGSTVNSDHDQTFDFRSSSVTGPTSYDLRIIRESGSNGEARIIQNGSGQTFISTNDEINGVIDRIRVNADVGNPFEIYKDGVWVAVATGGASLPLVGGTMTGPIQFNKILSSNNILMDLQQGYAIYSDDVGTYDSSVSRLWIDGPSIGEIHIGPKTTGNLRGIELRTDRLDVTGEIFSSSDITLLSDERVKSEIETIDDGLEKVYAMRGVHYIKDGKFSTGVIAQELEKIAPELVKDAGELKAVNYPQLTAYLIEAVKDLVDQVNDLNRRIITLENNQ
Physico‐chemical
properties
protein length:597 AA
molecular weight: 63951,80000 Da
isoelectric point:4,35037
aromaticity:0,04858
hydropathy:-0,03970

Domains

Domains [InterPro]
IPR051577
485–595
IPR051577
IPR030392
505–555
IPR030392 Coil
IPR030392
505–590
IPR030392
AIK68264.1
1 597
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RleM_P10VF
[NCBI] 		1527770 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizobium leguminosarum
[NCBI] 		384 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Rhizobium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK68264.1 [NCBI]
Genbank nucleotide accession
KM199770 [NCBI]
CDS location
range 25933 -> 27726
strand -
CDS
ATGGTTAACGTAACTCCAATTTCGCCTATCGTTCCAGGTGACACTTCTGTCGGTGATTCCGTCGCGAAAGCGAACGACGTCTTCAGCAGAATTGTAGAACAAGGACAGGCAGTCAACGGTCTTCTGATCGACGTCGGTGACAAGGCTTCACTCCAGACCAGTATCAAGACGAACCTCGTGGCAGCGATCAACGAGATTCTGGTTCGCTTCAACGATGGTTTCCTCGTCGAGAACATCACTGGTCTTCTCGCAGATCTCGACACGACGAACAAGACGAACCTCGTCGGAGCTATCAATGAGGTTGTCGGAGACGTAGGAGATCTCGACGCTCTCCAGTCTGTCAACAAATCGAGCATCGTGGCTGCGATCAACGAGATCCTGACCGAGAACGCCGGTGTCGGCAATCTTCAGAACCTCTCTACGATCGACAAATCGAACATCGTTTCTGCGATCAACGAACTGTCTCTGAGTATCGGATCGTTCTCGAACCTCTCTGGCTACCAGGACATCGTCTCCGCTATCAACGAAATCTCGGACGACATCGGAGATCGAGACGAACTGGAGACGACTGTCAAGAACAACCTGGTTGTCGCTATCAACGAGATCGTTTCGAAGTACGAACTCTTCGTGGCGAAAGACGGTTCGACTGCATTCACTGGCAACGTGAACCTCGACAACCACAAGGTCATCAATCTTGCTCCTGGCACGAACCCGAACGACGCTGTCACTGTAGCTCAGATCCCTGAACTCGTGAAGCTCGGCGACGTAGACAGTCTGTCCACTTCTACGAAGGAAAATGCTGTCCTTGCTATCAACGAAGTAGTCGGCTACATCGGTCAGCTCAATCTGCTGAATACGACCGTGAAGACGAACATCGTGGCTGCCATCAACGAGATCGTTGCCAACATCGACTATCAAGACATGCAGACCAAGCTGTCTGGAGAGACTCTGATCAAATTCGGTTCTACCGTCAACAGCGATCACGACCAGACTTTCGACTTCCGTTCGTCCTCTGTCACTGGTCCTACGAGTTACGATCTTCGTATCATCCGTGAGAGTGGTTCGAACGGCGAAGCTCGTATCATCCAGAACGGTAGCGGCCAGACATTCATCTCGACCAATGACGAGATCAACGGTGTCATCGATCGAATTCGAGTCAACGCTGACGTAGGCAATCCTTTCGAGATCTACAAGGATGGTGTCTGGGTTGCAGTCGCTACAGGCGGTGCTTCACTTCCTCTGGTCGGTGGCACGATGACTGGTCCGATCCAGTTCAACAAGATCCTCAGCTCGAACAACATTCTGATGGATCTCCAGCAGGGTTACGCCATCTACTCTGATGACGTCGGTACTTACGACAGCTCTGTGAGCCGTCTCTGGATCGACGGTCCTTCTATCGGCGAAATCCACATCGGTCCTAAGACCACAGGCAATCTTCGTGGTATCGAACTTCGGACCGATCGACTCGACGTCACAGGTGAGATCTTCTCGTCAAGCGACATCACGTTGCTCTCTGACGAACGAGTGAAATCTGAAATCGAGACGATCGATGACGGACTTGAGAAAGTGTATGCCATGCGCGGTGTCCACTACATCAAGGACGGCAAGTTCTCCACTGGTGTCATCGCACAGGAACTCGAGAAGATCGCTCCTGAACTCGTCAAGGATGCAGGTGAGCTCAAGGCCGTGAACTATCCGCAGCTCACTGCTTATCTCATCGAAGCCGTGAAAGATCTTGTCGATCAAGTGAACGACCTTAACCGCCGCATCATCACGTTGGAGAACAATCAGTGA

Tertiary structure

PDB ID
ae9dfe66289fd804593c63464f14492d1ebcce6dd0277d8fc0cf662d27102287
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Rhizobium leguminosarum phages from western Canadian soils and complete genome sequences of rhizobiophages vB_RleS_L338C and vB_RleM_P10VF Restrepo-Cordoba,M., Halmillawewa,A.P., Perry,B., Hynes,M.F. and Yost,C.K. 2015-09-16 — GenBank