Protein

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Genbank accession
YP_009859405.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,69
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKGWSFGALTDALRSAAFVNTGSNVGEVMTVGTFNFGRKNIPIIASLDMANYAFSAGEMLYVNNNNITNRPAGMNNMTGSQAVRIQAVSLADNTVTLLVTNGAERTYLVTRNGDKSFSTGQVSSAYNGTMDMTAANVFNMGGTGTDNFVTIFMPNKANTAKAYIQYSGAVNELYLCAGGAGRLTLGGDGTLVSDQRFYSNNGNSNFWGCISGEFYTQGKPGSRINMQEQGLHIGWNEDNSPSSGAGCFVNNQGGGTGGFRFRNVNSNNSVQTAEWRMDGASGNFIASGDILAVRKLYSGNGGSYMQEDGNLYGGAYGGYLTTWVSNNVNALNNNINNRFREVRAVNQRQVNNTQGPLGGFLTGLGDFGANDGYCWISDLQLFKDSAGWVQCGIG
Physico‐chemical
properties
protein length:395 AA
molecular weight: 42022,93700 Da
isoelectric point:5,91827
aromaticity:0,10633
hydropathy:-0,29696

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_SSEM1
[NCBI] 		2721760 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009859405.1 [NCBI]
Genbank nucleotide accession
NC_048875.1 [NCBI]
CDS location
range 51766 -> 52953
strand +
CDS
ATGGCTAAAGGTTGGTCTTTCGGGGCATTAACAGATGCCCTACGCTCGGCGGCTTTCGTCAATACCGGCAGCAATGTTGGTGAAGTAATGACTGTGGGAACTTTCAACTTCGGTCGAAAGAATATTCCAATCATTGCTTCATTGGATATGGCGAACTATGCATTCTCTGCTGGTGAAATGTTGTATGTGAATAACAACAACATTACTAACAGACCTGCTGGCATGAATAACATGACAGGCAGCCAAGCTGTTCGAATCCAAGCTGTCTCACTTGCTGATAACACAGTGACACTGCTGGTTACAAATGGCGCTGAGCGAACTTATCTTGTCACCCGAAATGGTGATAAGAGTTTCTCTACTGGTCAAGTTTCATCTGCATACAATGGCACGATGGATATGACTGCTGCCAATGTGTTTAACATGGGTGGCACTGGTACGGATAACTTCGTAACCATCTTCATGCCAAATAAAGCAAACACAGCTAAAGCGTACATCCAGTATTCTGGTGCTGTGAATGAACTTTATTTGTGTGCTGGTGGTGCTGGCCGTCTGACACTTGGTGGTGATGGTACTCTTGTATCCGACCAGAGATTCTACAGCAACAATGGTAACTCAAACTTTTGGGGTTGTATCTCTGGAGAGTTCTACACTCAAGGTAAGCCGGGTTCTCGTATCAACATGCAGGAACAAGGATTACACATTGGTTGGAATGAAGATAACTCACCCTCATCTGGTGCTGGTTGTTTTGTTAACAACCAAGGTGGCGGCACTGGTGGATTCCGATTCCGCAACGTAAACTCCAATAACTCTGTCCAAACTGCCGAATGGCGTATGGATGGTGCAAGCGGAAACTTCATTGCATCTGGAGACATTCTTGCTGTAAGGAAACTTTACTCCGGTAACGGCGGTTCCTACATGCAGGAAGATGGTAACTTGTATGGCGGTGCATATGGCGGATACCTGACAACTTGGGTTTCCAACAATGTCAATGCATTGAACAACAACATCAACAACCGCTTCCGTGAAGTTCGTGCTGTGAACCAACGTCAGGTTAACAACACACAAGGTCCACTTGGTGGCTTCCTTACCGGACTTGGTGACTTCGGTGCCAATGATGGTTACTGCTGGATTTCCGACTTGCAACTGTTTAAAGACAGTGCTGGTTGGGTACAATGTGGGATTGGCTAA

Tertiary structure

PDB ID
ef500860683aff9e01949d9de7a8d459b02a69879cba1bf7ca818ee6b1e09364
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea agglomerans bacteriophage vB_PagM_SSEM1 Truncaite,L., Alijosius,L., Petrauskaite,E. and Simoliunas,E. 2012-05 — GenBank