Protein

View in Explore
Genbank accession
AIX43014.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFKINGVVRIDNSGNGFLGIVTATDANITGVLTATEVDAKVSSKAITEQTDGTVDDVTGADELLLLDAETGGLLRVSIDEFVQGSGIGTLVTDFDNLTVTGITTVATLKGIGSSNISVGSSLSFADGTEIIMGDSGDFSIHHDGDHTYLDETGQGNLKLRTNNFRVTNIAETKPAITAQVTSGVELYFDGNKKIETTNTGVLVSGMLTADRLRSGDIAARNVITLGITTIQDHLEVNDSTGSGTEYNLNVKTNGSSTFGVLGNGNILLGNSSGAPFMATNDHHATSKKYVDDAIDDSVSYIGASAWGSVAADGSLRNGLNCTTSQTSGGVYQVTFTTPLPNANYAITGASSDSAFWVKDGSETVNGFTVYIVDVDGNSINRDLSFAVFSANAIVPPSGVGADAWGTFSGTTGDLQAGMNISSTTRTALGEYDVEFITEMPSDSEYAVTAVSNASQAKFINIRNKSTSGFKVVTRDGSGNISDGAVSFAVHASSTVTPTYTWTRDGTTLKTANDGDDVEVNGRGLFESSEPADYVVRVKNTDTGTINPACLLLDMRDVDASNNYSALRVVGYNTTTGLDINSDGALTTQGQITANVSNQGGENSAIKAIQTNSNGYAVWVGDGPNSTDRTASIGPDGRATFSSGKISLGPTGSGTFADNNIFLQSDGQVRCTNVITSSALAGSGTRPLYADSSGGLTISSSDRSLKTNITTLPDQIQVVKALNPVSFNWIEKERLGAGLEIGFIAQEVEEIVPEVVRSTAGILSVDYAKLTATLTSALQIALTRIEALEAKVQSLEEGVTPD
Physico‐chemical
properties
protein length:802 AA
molecular weight: 83415,70590 Da
isoelectric point:4,39692
aromaticity:0,06110
hydropathy:-0,11322

Domains

Domains [InterPro]
IPR036388
688–768
IPR036388 Coil
IPR030392
701–792
IPR030392
IPR030392
701–757
IPR030392
AIX43014.1
1 802
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f
[NCBI] 		1493511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX43014.1 [NCBI]
Genbank nucleotide accession
KJ019148.1 [NCBI]
CDS location
range 163955 -> 166363
strand +
CDS
ATGGCATTTAAGATTAATGGCGTAGTACGCATTGATAATAGTGGCAACGGTTTTCTGGGAATTGTAACCGCTACCGACGCTAATATCACAGGAGTTCTCACTGCCACTGAGGTGGATGCGAAAGTATCATCTAAGGCAATAACTGAACAAACAGATGGAACCGTAGATGATGTAACTGGTGCAGATGAACTATTACTATTAGATGCCGAGACTGGTGGATTACTAAGAGTATCAATAGATGAGTTCGTGCAGGGTTCAGGCATTGGAACTCTAGTAACGGACTTTGATAACTTAACTGTTACTGGTATCACAACCGTTGCCACCCTCAAAGGTATTGGATCTAGTAATATCAGTGTAGGAAGTTCACTTTCCTTTGCTGATGGTACAGAGATCATCATGGGTGACTCTGGTGACTTCAGTATTCATCATGATGGTGATCATACTTACCTAGATGAGACGGGGCAGGGTAATCTAAAACTCCGTACAAATAACTTTAGAGTAACAAATATAGCAGAAACAAAACCAGCTATTACAGCACAGGTTACTTCTGGTGTTGAGTTGTATTTTGATGGTAATAAGAAGATAGAAACTACAAATACTGGTGTTCTTGTGAGTGGTATGCTCACTGCTGATAGATTAAGATCAGGTGATATTGCTGCTAGAAATGTAATCACACTGGGCATTACCACTATTCAAGATCACCTAGAGGTGAATGATAGTACTGGTTCTGGTACCGAATACAATCTCAATGTTAAGACCAATGGTAGTTCTACCTTTGGTGTCTTAGGTAATGGAAATATTCTACTTGGAAACAGTTCCGGTGCTCCATTCATGGCGACGAATGATCACCACGCAACTTCCAAGAAGTATGTGGATGATGCTATTGATGATTCCGTCAGCTACATCGGCGCTAGTGCTTGGGGTAGTGTTGCTGCTGATGGATCACTTCGGAATGGACTAAACTGCACAACTTCACAAACAAGTGGAGGGGTTTATCAAGTCACGTTCACAACTCCTCTTCCTAATGCAAACTATGCTATCACTGGAGCATCTAGTGATAGTGCTTTCTGGGTAAAAGATGGTTCAGAAACAGTCAATGGATTTACAGTTTATATAGTTGATGTAGATGGAAATTCAATAAATAGAGATTTATCCTTCGCCGTCTTCAGTGCCAACGCCATCGTGCCGCCGTCAGGCGTAGGCGCTGACGCCTGGGGAACATTCTCTGGAACGACTGGCGACCTGCAAGCTGGGATGAATATCAGCTCAACTACACGTACTGCCCTAGGAGAATATGACGTAGAATTTATAACCGAGATGCCTTCGGACTCAGAATATGCCGTAACCGCAGTATCTAATGCAAGTCAAGCAAAGTTTATTAATATACGCAATAAGTCTACAAGTGGTTTTAAGGTTGTAACTAGAGATGGTTCTGGAAATATTTCTGACGGAGCCGTATCCTTTGCCGTCCACGCATCATCAACAGTCACGCCAACCTATACCTGGACACGCGACGGCACAACGCTGAAGACTGCTAATGATGGTGATGATGTAGAGGTGAACGGTCGGGGCCTTTTCGAAAGCAGCGAGCCGGCTGACTATGTTGTGAGAGTAAAAAACACCGACACAGGTACTATCAATCCCGCATGTTTGCTGCTGGACATGCGAGATGTCGATGCTTCTAATAATTATTCAGCCTTAAGGGTAGTAGGTTACAACACTACAACAGGTCTTGATATAAATTCAGACGGCGCTCTCACGACTCAGGGACAGATAACCGCAAACGTCAGTAACCAAGGCGGAGAGAATAGTGCAATCAAGGCAATTCAAACCAACTCCAACGGGTATGCGGTATGGGTTGGTGATGGACCTAACTCTACAGATAGAACCGCTTCTATAGGCCCTGATGGAAGAGCCACGTTTTCCTCCGGCAAAATTTCGCTGGGTCCGACCGGCTCGGGGACGTTTGCAGACAATAACATCTTCCTGCAGTCGGACGGACAAGTCAGATGCACGAACGTAATTACATCTTCAGCTTTGGCAGGCTCAGGCACCAGACCATTATATGCCGACTCATCTGGTGGTTTAACTATCAGCTCTTCTGATCGTAGTTTGAAGACGAACATCACTACTCTTCCTGATCAGATACAAGTAGTCAAAGCATTAAATCCCGTTTCGTTTAATTGGATAGAGAAAGAAAGACTAGGTGCAGGTCTTGAAATTGGATTTATTGCTCAAGAAGTAGAAGAAATCGTTCCTGAGGTTGTTCGTAGCACTGCCGGAATACTTTCAGTAGATTATGCAAAATTAACCGCAACTTTAACGTCTGCCCTACAGATAGCACTCACCCGCATCGAAGCCCTCGAAGCGAAAGTCCAATCACTCGAAGAAGGTGTGACACCTGACTAA

Tertiary structure

PDB ID
9974773c378e0381e350941ed9bd35f12c73ef0fc9546c480430ae10ff4b81c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank