Protein

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Genbank accession
AXC34713.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 0,54
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,64
TF
Evidence Phold
Probability 1,00
Protein sequence
MADYGQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRNGFVYKAVRTHTGSDPATVSSNWARAFADFTTASSALGSLTPREGGIPFFISASGAGVFDSTDYGRGMLNVANAAGARNYISAQESSVVLSNLSTVTRAANAVPYFNTDTSMATFNITAFGRGLVNAGDATNARTFLGLANSATITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTASKLRAPVTINGVAFDGSQNIVLPGLDTSYAGVVARLHINGANMTGTDKTTQLALRNKSDTDWISLVTPDDSSLVFQFRGPEAANATLRVNSNVVFHAGNQYGLGATQTQARERLMVDRLAQNTTQTVLYNADKSRYFWLQDNGVSGIWDATTNTPLWRFSRLGQLDYGTVPVAQITGLANSATIPASASNLTNQIVVRSGTGDIAVQGVTAFGAVLGTDYIRVRASTGNAHLVFQRNDGAEVGLIWGIPSANSLNFRTAGGATGMSLAGQDLTVVGRVNAATLNSSGNVNSGNSVIAAGNVQAAGRVYCGDAFMSSNGNLTGGAFGSYGTLTNWVDSVYARKTDVMTDAQILAATSRGSAQAVGTYVFAIAASGSGDVGTVVAGTSLRSSSPVNYHGTTLSGSYRCMGRFGAGGSNQITLFQKVAA
Physico‐chemical
properties
protein length:685 AA
molecular weight: 71699,74940 Da
isoelectric point:8,96679
aromaticity:0,08759
hydropathy:-0,07372

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage SRT6
[NCBI] 		2268590 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC34713.1 [NCBI]
Genbank nucleotide accession
MH370478 [NCBI]
CDS location
range 46570 -> 48627
strand -
CDS
ATGGCTGATTACGGTCAACTACCTATTGAAAATATCTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCAGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAGTGGTGGAACTGGAAATGGAACCTTCACGATACCAACCTAGCGTATCTGCTACAGAAGGGCATCCCAGAATGGACCAGCACTCAAGAGTATATCGCAAACAAGTCGTTCTGCACAAGAAACGGTTTCGTCTACAAGGCTGTCCGTACCCATACAGGTAGCGACCCGGCCACCGTTAGTTCTAACTGGGCCCGAGCTTTCGCAGACTTTACCACAGCTAGCTCTGCACTTGGAAGCCTGACTCCGAGAGAAGGAGGGATTCCTTTCTTCATTAGCGCATCTGGTGCAGGTGTGTTTGACTCTACGGATTATGGACGTGGCATGCTGAACGTAGCCAACGCAGCGGGAGCTAGAAACTACATTTCGGCTCAAGAGAGTTCTGTTGTCCTGTCTAACCTATCTACTGTGACTAGGGCTGCCAACGCGGTTCCGTACTTCAACACCGACACCTCGATGGCGACCTTCAACATTACAGCGTTCGGAAGAGGCCTAGTCAACGCTGGCGATGCAACTAACGCAAGAACCTTCCTAGGCCTAGCTAACTCTGCTACTATCACGGCTGATCCAGCCAACAGAGCACACACTCTGGTCTATAGAGACGCTGCTGGTAACTTCAACGCTGGTGTGATTACAGCCACTCTTTCTGGTAACGCGACTACAGCCAGCAAGCTCAGGGCTCCAGTTACGATTAACGGCGTAGCGTTCGACGGAAGCCAGAACATTGTTCTGCCGGGCCTAGATACAAGCTACGCCGGGGTTGTAGCGAGGCTCCATATTAATGGAGCTAACATGACCGGAACAGATAAGACTACCCAGTTGGCTCTTAGAAATAAATCTGATACAGATTGGATTAGCTTGGTGACTCCTGATGACAGCTCGTTGGTATTTCAATTTAGAGGGCCAGAAGCGGCTAACGCCACTCTGCGGGTTAACTCTAATGTTGTGTTCCACGCGGGAAACCAGTATGGACTAGGAGCTACTCAAACTCAAGCCAGAGAGCGGCTCATGGTTGACAGGCTGGCACAGAACACGACTCAGACTGTGCTGTACAACGCAGATAAGAGCAGGTACTTCTGGTTGCAAGATAACGGTGTTTCCGGTATCTGGGACGCAACGACTAACACCCCTCTATGGCGTTTTTCTAGACTAGGCCAGCTCGACTACGGAACAGTCCCTGTTGCACAAATTACAGGATTGGCCAACTCCGCGACAATTCCGGCATCCGCCTCCAATCTGACTAATCAGATTGTTGTGAGGAGCGGAACAGGAGATATCGCAGTACAAGGCGTTACAGCGTTTGGCGCTGTTCTGGGAACAGACTATATTAGAGTAAGAGCCAGCACTGGTAACGCTCACCTAGTATTCCAGAGGAATGATGGAGCAGAGGTAGGGCTTATTTGGGGAATCCCGTCTGCCAACTCTCTGAACTTCAGGACCGCAGGCGGTGCGACAGGCATGTCTCTGGCTGGTCAGGACTTGACTGTAGTTGGCAGGGTGAATGCTGCGACACTCAATTCGTCTGGCAACGTCAACTCTGGCAACAGCGTGATTGCTGCCGGGAACGTGCAGGCTGCTGGCCGTGTGTACTGCGGCGATGCTTTTATGAGCAGCAACGGCAACCTTACTGGCGGAGCTTTCGGCTCTTATGGGACTCTTACCAACTGGGTAGACTCTGTATACGCCAGAAAAACTGACGTAATGACTGATGCCCAAATCTTGGCTGCCACTTCTAGAGGTAGTGCTCAGGCTGTGGGAACATATGTCTTTGCGATTGCAGCTAGCGGAAGTGGGGATGTTGGGACTGTAGTAGCTGGTACGTCTCTAAGGTCTTCGTCTCCCGTCAACTACCATGGAACTACGCTATCCGGTAGCTACAGGTGCATGGGTAGGTTCGGAGCCGGAGGTTCTAACCAGATTACCTTGTTCCAGAAGGTTGCAGCTTAA

Tertiary structure

PDB ID
b6de989d7539feb2f4a2f3738a8d759a5529adb43ca1a1bde3e1d4c33e0d6ee0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6455
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic sequence of Pseudomonas aeruginosa phage SRT6 Fan,X., Li,Q., Yi,T., Zhang,F., Zhang,C. and Ma,H. 2018-11-15 — GenBank