Protein

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Genbank accession
BAS04879.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MGFDLTNLNAAFTTLTTWVKNGLAKKADATATSNALATKANATDLATTNTNLSNLTTTVGTKADATATNTALAGKQNTVLTGTAVPANTVGVDGDVFLLTDS
Physico‐chemical
properties
protein length:102 AA
molecular weight: 10250,25620 Da
isoelectric point:4,84918
aromaticity:0,03922
hydropathy:0,03235

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSF1
[NCBI] 		1689679 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 Bacteria > Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Ralstonia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAS04879.1 [NCBI]
Genbank nucleotide accession
AP014927 [NCBI]
CDS location
range 87182 -> 87490
strand +
CDS
ATGGGTTTTGACCTGACAAACCTGAATGCCGCATTCACCACCCTCACGACGTGGGTGAAGAATGGTCTGGCTAAGAAGGCTGACGCAACTGCGACTTCGAACGCACTGGCCACCAAAGCCAATGCAACCGATCTCGCAACCACCAACACAAATCTGTCGAACCTCACGACCACCGTGGGTACGAAGGCAGATGCAACGGCAACCAACACTGCACTGGCAGGCAAACAGAATACCGTGCTCACTGGCACAGCTGTTCCTGCCAATACCGTCGGTGTCGACGGTGACGTGTTCTTGCTGACCGACAGCTAA

Tertiary structure

PDB ID
1f369f4c9aa97e92f425d6158ca677c9996ec2020bfdc54d550da55f3a340a57
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9118
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two Asian jumbo phage RSL2 and RSF1 infecting the phytopathogen Ralstonia solanacearum share common features related to the phi-KZ-like phages Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2016-07 — GenBank