Protein

View in Explore
Genbank accession
ADE87922.1 [GenBank]
Protein name
conserved phage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence GenBank
Probability 1,00
Protein sequence
MELKTYFAQDRNGSLIPGATVTIYLTETTTMASGLKTVGGNALANPFTADADGKIQFRAPDGIYDMQVSVGTDTGTRVTFQCVDIGQQLSDANGAAERAESAAQSIEINVANINANAREQWRRTLADAGFNLVDGSFEEGATAQSVNDAVWHIAGGACYSWGGNLPKSVPEESTPEGTGGISTGAWNDLKSQTLRSQLGSNSGVSIVGGLEERLSLVDISKVSGTKDSAMLNSIFSAYRGRNVTLYSSVALTFNIDTDVTAYGNFDFSNLTFNLSGGKVIYADERDISEYKKTITLTNYPLVELTSVLPTSDVLEGWENSLVKIISPTEVDLYRLLNGVSTPRYKGEVNFMAKAGELAYTLKNTYNDAVTCTLYKLPNKRNKIVLPRITGQFNRFTFDIQRSLVDVEVVYANEMGMTAMDSNILGSSSTYGVVWTISSSGITQSDTNSRYSVLMEYTLKHTFNSSIVGKGWRSVDGNYCRDTVVRDCTMDSFNLHYGSSKILIDNCRIPNGLSFGTGAFDEATQIINSHTGPFGIRSDYGEHKGDFIVRGGSVRVAPDKTGIVDLFTCRCDNVISSGNPLQPRALNLPKNVIIATNIYWPDSVTLNIVSFKNNFKTQNSPLRDFVMPDVIDFTGSTFNGKTARFEWALSYHDATTRPMTLVKLTPAKSTGCKVTAYVGYQAEYATCLYGLESNMDMTFMNITSGMNRSYIRVEKGIMRRFVGYSGGTTYMQGGVYFDQSFIDWDTGNNPVAGFISFTYCLIDGTRAKGSSPTKPIVNAFVHRSANNICYDIVSTDSRDIVDKRFALCSREGAAGNYSAGEIPVYY
Physico‐chemical
properties
protein length:825 AA
molecular weight: 90073,98330 Da
isoelectric point:5,46862
aromaticity:0,10061
hydropathy:-0,20618

Domains

Domains [InterPro]
Coil
89–116
Coil G3DSA:2.10.10.80
IPR040775
136–188
IPR040775
ADE87922.1
1 825
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ECO1230-10
[NCBI] 		669875 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADE87922.1 [NCBI]
Genbank nucleotide accession
GU903191 [NCBI]
CDS location
range 12424 -> 14901
strand -
CDS
GTGGAATTAAAAACATACTTCGCGCAGGATCGAAACGGTTCGCTTATTCCAGGCGCTACTGTCACAATTTACCTGACAGAAACAACCACGATGGCAAGCGGCCTTAAAACGGTGGGCGGCAATGCGCTAGCTAACCCGTTCACGGCTGACGCAGATGGAAAAATCCAGTTCCGCGCACCAGATGGCATTTACGACATGCAGGTTAGTGTTGGGACAGATACCGGCACGCGCGTGACGTTCCAGTGCGTTGACATCGGTCAGCAACTATCTGACGCAAATGGCGCTGCGGAACGTGCTGAATCAGCAGCGCAAAGCATTGAAATTAATGTAGCAAACATAAACGCTAACGCACGCGAGCAATGGCGCAGAACGCTGGCTGATGCCGGTTTTAACCTTGTGGATGGCAGCTTTGAAGAAGGTGCTACAGCGCAGTCAGTTAACGATGCTGTCTGGCATATTGCTGGTGGTGCTTGCTACTCATGGGGTGGAAATCTTCCAAAGAGCGTACCGGAGGAATCGACACCGGAAGGTACTGGCGGAATTTCAACAGGTGCATGGAACGACTTGAAATCGCAAACACTGCGCAGCCAGTTAGGTTCAAATAGCGGTGTTTCTATCGTTGGAGGCCTGGAAGAACGCCTGTCACTGGTTGATATATCTAAAGTAAGCGGCACGAAAGATTCAGCGATGCTTAACTCTATTTTTTCCGCGTATCGCGGGAGAAACGTAACGCTGTATTCAAGCGTCGCACTTACTTTTAACATTGACACAGATGTTACCGCATACGGAAACTTTGATTTCAGCAACCTGACATTCAATCTTTCTGGCGGAAAGGTGATCTATGCAGATGAGCGGGACATTTCAGAGTATAAAAAAACCATAACCCTGACAAACTACCCACTTGTTGAGTTAACGTCTGTTTTGCCGACATCTGACGTTTTAGAAGGTTGGGAGAATTCACTAGTTAAGATCATCAGCCCAACAGAGGTTGATTTGTATCGACTGCTAAACGGTGTGAGCACCCCGCGCTATAAAGGCGAAGTCAATTTCATGGCGAAAGCCGGAGAGTTAGCCTATACGCTGAAAAATACGTATAACGATGCTGTTACCTGCACCTTATACAAACTGCCAAACAAGCGTAACAAAATCGTCCTTCCGCGCATCACCGGCCAATTTAACCGGTTTACTTTCGACATCCAACGTTCATTGGTTGACGTAGAAGTTGTATACGCCAACGAAATGGGCATGACCGCAATGGATTCAAATATTCTTGGCAGCAGTTCTACATATGGCGTTGTCTGGACCATTTCTTCTTCTGGTATCACGCAATCAGACACAAATTCTCGCTATTCGGTACTGATGGAATACACGCTCAAACATACCTTCAATAGTTCCATAGTTGGAAAAGGCTGGCGGTCAGTGGATGGCAACTATTGCCGTGACACTGTGGTCAGAGACTGCACAATGGACAGTTTCAACCTTCATTATGGTTCTTCAAAGATACTGATTGATAACTGCCGAATCCCAAACGGCTTATCATTTGGTACTGGTGCGTTTGATGAAGCAACACAAATTATAAACTCACATACCGGGCCTTTTGGTATTCGTTCGGATTATGGCGAACATAAGGGCGATTTTATTGTTCGCGGTGGTTCTGTTCGCGTCGCGCCTGATAAAACTGGAATTGTTGACCTGTTCACCTGCCGTTGTGACAACGTAATTTCTTCTGGTAACCCACTACAGCCACGAGCATTGAACCTGCCGAAGAACGTTATTATTGCAACGAATATTTACTGGCCAGATTCCGTTACGCTTAATATTGTTTCGTTTAAAAATAATTTCAAAACACAGAATTCACCACTGCGTGATTTTGTTATGCCGGATGTCATTGACTTCACCGGAAGCACATTCAACGGCAAAACTGCACGGTTTGAATGGGCGCTGTCCTATCATGACGCCACCACCAGGCCTATGACATTAGTGAAACTGACGCCAGCAAAATCAACTGGTTGCAAAGTTACTGCTTATGTCGGGTATCAGGCGGAGTATGCAACCTGTCTGTATGGCCTTGAAAGTAACATGGACATGACTTTCATGAACATTACATCAGGCATGAACAGGAGTTACATCCGCGTAGAGAAAGGAATCATGCGACGTTTTGTAGGGTACTCTGGCGGAACAACCTACATGCAGGGCGGCGTTTATTTTGACCAGTCTTTCATAGATTGGGACACAGGGAATAATCCTGTTGCTGGTTTTATTTCGTTCACTTATTGCCTTATCGACGGAACACGCGCAAAAGGTTCATCACCAACAAAACCGATCGTCAATGCTTTTGTTCATCGTTCTGCGAACAATATTTGTTATGATATAGTTTCTACAGATTCAAGAGATATTGTTGACAAGAGGTTCGCACTGTGTAGCCGCGAAGGTGCAGCAGGTAACTATTCTGCCGGTGAAATACCTGTTTATTATTAA

Tertiary structure

PDB ID
0e5361356e83d67cbdcd63aa8ad5c031864145e94988c0d62145db7d056e463d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6549
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of vB_EcoM_ECO1230-10: A coliphage with therapeutic potential for bovine metritis Santos,T.M. and Bicalho,R.C. 2011 20875932 GenBank