Protein

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Genbank accession
CDW17212.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MIKLAEQQYFTLVTDIGKAAIANASVTGEKVDFAKIKVGDGGGSSYTPNESQTALKNVVWESTLEHAQVDKDNPNWVVIQKFIPGDVGGFEIREVGLFDSKDQLLAVSSYPTTYKPEADSGTVKELLIKVILVVSNVANINLKVDPTVILATLKDLQDLDSKIDTTKTELTNSIETTKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQIITIDDWVEDAENGFKATVTHSLLTQRIVVNIIDATTKENAVTNFKIIDDNSIEVRSETRSELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIEDRFVNLEEKVNGGLSNIATSVNELITYC
Physico‐chemical
properties
protein length:336 AA
molecular weight: 36923,92680 Da
isoelectric point:4,60932
aromaticity:0,05655
hydropathy:-0,24583

Domains

Domains [InterPro]
IPR022225
6–153
IPR022225
IPR051934
7–238
IPR051934
CDW17212.1
1 336
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCDHM19
[NCBI] 		1522092 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium
[NCBI] 		1485 Bacteria > Firmicutes > Clostridia > Clostridiales > Clostridiaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDW17212.1 [NCBI]
Genbank nucleotide accession
LK985322 [NCBI]
CDS location
range 22169 -> 23179
strand +
CDS
GTGATAAAATTGGCAGAACAACAATATTTTACTCTAGTAACTGACATTGGTAAGGCAGCAATAGCAAATGCAAGTGTTACAGGTGAAAAAGTAGATTTTGCAAAGATAAAAGTTGGAGATGGAGGAGGGAGTTCTTATACTCCAAATGAGAGTCAAACAGCACTAAAAAATGTAGTTTGGGAAAGCACACTTGAACATGCACAAGTAGATAAAGACAATCCTAACTGGGTAGTAATACAAAAATTCATACCTGGCGATGTTGGAGGATTTGAAATAAGAGAAGTTGGTCTATTCGATTCCAAAGACCAATTATTAGCGGTTTCTAGTTACCCAACAACATATAAACCTGAAGCAGATTCGGGGACTGTAAAAGAACTATTAATAAAAGTAATATTAGTTGTATCTAATGTAGCTAATATAAATCTAAAAGTAGACCCTACTGTCATTCTAGCAACTTTAAAAGATTTGCAGGACCTAGACTCTAAAATTGATACAACTAAAACAGAATTAACAAACAGTATAGAAACTACTAAAACAGAGCTAAACACTAGAATTGACACAGAAAATGAGAAACAAAATATTAAAATTGACCAATTAATCGCAGGTGGTTCAAATGTGGCATCTACTCAAATAATAACAATTGATGATTGGGTTGAGGATGCAGAAAATGGATTCAAAGCAACTGTAACACATAGTTTATTAACACAGAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAAAATGCAGTTACAAACTTTAAAATTATAGATGATAATTCTATAGAAGTTAGAAGTGAAACAAGGTCAGAATTAAACGTTTATGTGATAAATGGAAATGCAGAAACTCATTTTATTAATGCAACTGTAGATGATAACAGAGTATCTGAAATGACTACTTATTCGTCTAAGAAAATCGAAGATAGATTTGTTAATCTAGAAGAAAAGGTAAATGGTGGTTTATCTAATATTGCAACTAGTGTAAATGAGTTAATAACTTATTGTTAG

Tertiary structure

PDB ID
2b5a0eeb159959042ed7663fef733786cc2ec0a9151977e617d5ccf841be4786
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Abundant and diverse CRISPR spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen Hargreaves,K.R., Flores,C., Lawley,T.D. and Clokie,M.R.J. 2014-10-31 — GenBank