Protein

View in Explore
Genbank accession
QDB70491.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MTCSNKPNYTPFKLQGLAPTKQWGLGRSASYERFNPNEFHALEDEVKITFPVDFRGKVKGSNTPNPSRGFSHASQIYRENVLRGSQFLSKPSLLFNGAVYNEKTLYNGAMVASTQEVNQGLMFYWEDFINPDPRIKEGDMVTFSVDVRSTGEDIPTGAVAFKGTSNFEDYYKVLEQPITKEFTRISFTTRFLSKEWEWDEAFGMFWGVENVPVTDYPMFQYDKDKLVGFIQAQESVQLEFSRPMVSTIGKTAYIESGDDMFSNNKWDWSKAVSKGRLNEFDGKYNTNGIKQDWAMPEFIPIFKGSERIHFYKKTTLTETTDAGHGYGKILFYSAANEDSYMNVYKKFPHEAGVYGGYAAEVEVPIGATHYRVHITSERGKATTEAYVQSSANDWSEFSQEWYDGLSGKLDGKTARAETFYRKEMVEMEFELHFAEAVQKALPNIFKGLTTDAEKQQRLRDIAYQFDSTMIARGRGQGNNLADWIFYRWAPDGSIEEQTMKQFRGEGLTSVTHPSSYQEWINPQGRIVTSLRSNRIIPNSMYMGTDTLSGKYDPKLTTLQLEVNGELVDKKATLDKTSEVFTFTGLKGFLKPEDKVRIAGWNNRNNQWSITYSNVLMGNTPENVAEFNERAFVEADYLVTNMSVIVTQSQMDEWGFNPNLPDYRIESLERPASRTEEYMINSMVQVTHAYDIYGFVESNYPEFFGDCYTFDDRIRKINERIKQFNIVATTYSEEPWEDGNPTIFISAEARNPDRDYDVKAEINQTVELQINNSKGHFIHPNGYIYVGFARMPRSDRETGISVEAELSFDFTMDRQYDSLPRVFRYNYQKQPWFLFVRNINRSVLAPKVNTLTPINGGTRRYNFGATEDARYISMDCFIKAPAEEDMPKLMEELADFLDVGETVIQFSDNKDRYYKVMLDGSTDLSQTLHVGTLTLTFVLLENTAIGEEVVESFDIDSTTGSVPFIELENMGTADAYPTYQLTFEEPVGYVDLIGTDTSANVSIGRRPKGNEDEVKVDLRPRKFYSKFTSTDGAGWTAMNDTHLPQIEGYQTKLQGTVQRVNGMANQDKWNYGDTSHRGWHGAGIIANLQKNLDDFYMEASIVATGKPVKTSANAIFLIFYDENNTPYAYTKVGTRPQEGNLDSYVAYAGDWGKRKVVNNGAKWKNFWGKVSVQRRDNRWRLIVGQYKDRRYSPSPEASFNFGQNMLKDTRDTGWFDLPPETWGKKFARVGIFFGQYSHRPKLGHLSVRRLIVWENLEEYGETPLEGTPIMFHEGDTVVIDSSKAQTYLNGELTPSLVDPMTDWFPITKGDNYIGVNNFKGKIDIVYNERFK
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 152194,30320 Da
isoelectric point:5,25814
aromaticity:0,13083
hydropathy:-0,59429

Domains

Domains [InterPro]
G3DSA:2.40.30.200
820–940
G3DSA:2.40.30.200 G3DSA:2.60.120.860
IPR006520
826–938
IPR006520 IPR054738
IPR008841
862–937
IPR008841
QDB70491.1
1 1330
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage Entf1
[NCBI] 		2583507 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB70491.1 [NCBI]
Genbank nucleotide accession
MK800154 [NCBI]
CDS location
range 4948 -> 8940
strand -
CDS
ATGACATGTTCTAATAAACCTAATTACACTCCGTTTAAATTACAAGGTCTAGCCCCTACTAAACAGTGGGGCTTAGGCCGTTCTGCTAGTTATGAACGGTTTAACCCAAATGAGTTTCACGCCTTAGAGGACGAGGTTAAGATTACTTTCCCAGTGGACTTTAGAGGAAAGGTTAAAGGAAGCAATACACCTAACCCTTCACGAGGTTTTAGCCACGCCAGTCAAATCTACCGTGAAAATGTTTTAAGAGGAAGTCAATTCCTTTCTAAGCCTTCATTACTATTTAATGGAGCAGTATATAACGAGAAGACACTTTACAATGGAGCTATGGTAGCCTCTACTCAAGAAGTTAACCAAGGCCTAATGTTCTATTGGGAAGACTTTATCAATCCTGACCCAAGAATTAAAGAAGGCGATATGGTAACTTTCTCAGTGGATGTCAGAAGCACTGGTGAAGATATTCCAACAGGAGCGGTGGCCTTCAAAGGAACTTCTAACTTTGAGGATTACTATAAAGTCCTTGAACAACCTATTACAAAAGAGTTTACAAGAATCTCATTCACAACTCGTTTCCTATCGAAGGAATGGGAATGGGACGAAGCCTTTGGGATGTTCTGGGGAGTAGAGAATGTTCCTGTTACAGATTACCCAATGTTCCAATATGACAAGGATAAGTTAGTTGGATTTATTCAGGCTCAAGAAAGTGTTCAACTAGAGTTCTCACGGCCTATGGTTTCAACTATCGGAAAGACTGCTTACATTGAGTCTGGGGACGACATGTTCTCTAACAACAAATGGGACTGGTCTAAAGCCGTATCTAAAGGTCGTTTAAATGAATTTGATGGTAAGTATAACACAAACGGAATCAAACAAGACTGGGCAATGCCTGAGTTCATTCCTATTTTCAAAGGCTCTGAGAGAATCCACTTCTACAAAAAGACTACCCTAACGGAAACAACGGACGCTGGACATGGCTATGGTAAAATCCTATTCTACAGCGCTGCTAACGAGGATTCTTACATGAACGTATATAAGAAGTTCCCTCACGAGGCTGGTGTATATGGTGGATACGCAGCTGAAGTAGAAGTGCCTATTGGAGCTACTCACTACCGTGTTCATATAACTTCAGAAAGAGGAAAGGCCACTACAGAAGCCTATGTACAATCTTCTGCTAACGACTGGTCAGAGTTTAGCCAAGAGTGGTACGACGGACTGTCAGGAAAGCTTGATGGAAAAACTGCCAGAGCTGAGACATTCTACCGTAAAGAAATGGTTGAGATGGAGTTTGAGCTACACTTTGCGGAAGCTGTACAGAAAGCTTTACCGAACATCTTCAAAGGACTTACTACTGACGCTGAGAAGCAGCAAAGACTTCGTGACATTGCTTATCAATTCGATTCAACAATGATTGCACGAGGCCGTGGCCAAGGCAATAACTTAGCTGATTGGATTTTCTATAGATGGGCTCCTGACGGCTCTATTGAAGAGCAGACAATGAAACAGTTTAGAGGTGAGGGATTAACTTCAGTTACCCATCCATCAAGCTATCAAGAGTGGATTAATCCACAAGGTAGGATTGTAACATCTCTTCGCTCTAACCGAATCATTCCTAACTCAATGTACATGGGAACTGATACGCTAAGCGGTAAGTATGACCCTAAATTAACAACGCTTCAGCTAGAAGTTAATGGGGAGCTTGTTGATAAGAAGGCTACCTTAGATAAGACCTCAGAGGTATTTACATTTACAGGTCTTAAAGGATTCTTAAAGCCTGAAGATAAAGTTAGGATTGCTGGATGGAATAATCGTAACAACCAGTGGTCAATCACTTACTCTAATGTTCTTATGGGAAACACTCCAGAAAACGTTGCGGAGTTTAACGAACGAGCTTTTGTAGAAGCTGATTACCTAGTTACAAACATGTCTGTTATCGTAACTCAATCACAAATGGATGAATGGGGATTTAACCCTAATTTACCAGACTACCGAATTGAGTCGCTAGAGCGGCCAGCAAGTCGTACTGAAGAGTACATGATTAACTCAATGGTACAAGTAACACATGCTTATGACATCTACGGATTTGTTGAAAGCAACTACCCTGAGTTTTTCGGAGACTGCTATACCTTTGACGATAGAATAAGAAAGATTAATGAGCGAATTAAACAGTTTAACATTGTCGCTACTACTTATTCAGAAGAGCCTTGGGAAGACGGTAACCCGACAATCTTTATCAGCGCTGAGGCTAGAAACCCTGACAGAGACTATGATGTTAAAGCTGAGATTAACCAAACAGTTGAGCTTCAAATTAACAATTCTAAGGGACACTTTATCCATCCTAACGGTTATATATACGTGGGATTCGCTCGTATGCCAAGAAGCGACCGTGAGACAGGAATCTCTGTAGAAGCTGAATTAAGCTTTGACTTCACGATGGACAGACAGTACGACAGCCTTCCAAGAGTCTTCCGATACAACTATCAGAAGCAGCCTTGGTTCTTGTTTGTAAGAAACATTAACAGAAGCGTTCTTGCACCTAAAGTAAACACTCTAACTCCTATTAACGGAGGCACTAGACGTTATAACTTTGGAGCTACAGAAGACGCTCGGTATATCTCAATGGACTGCTTTATCAAAGCTCCTGCTGAAGAGGATATGCCTAAGTTGATGGAAGAGCTTGCTGACTTCCTAGACGTTGGAGAAACGGTAATCCAATTCTCAGATAACAAAGACCGCTACTACAAGGTTATGTTAGATGGCTCGACAGACCTTTCTCAAACGCTTCATGTAGGAACGTTGACACTGACTTTCGTACTGCTTGAGAATACAGCCATCGGTGAAGAGGTTGTAGAAAGCTTTGACATAGACAGCACGACAGGCTCGGTTCCATTCATTGAGCTTGAGAACATGGGTACGGCAGACGCTTACCCAACCTACCAACTGACCTTTGAAGAACCTGTAGGTTATGTTGACCTAATCGGTACAGACACCTCAGCCAACGTGTCAATTGGAAGACGGCCTAAAGGAAATGAAGACGAGGTTAAAGTAGACCTTCGCCCACGTAAATTCTACAGTAAGTTTACCTCTACTGATGGAGCTGGTTGGACGGCCATGAATGACACTCATTTGCCACAGATTGAAGGATACCAAACTAAGCTTCAAGGAACTGTTCAAAGAGTTAATGGAATGGCAAATCAAGACAAGTGGAACTATGGTGACACTAGCCATAGAGGCTGGCATGGAGCTGGTATCATAGCTAACCTTCAAAAGAATCTTGACGACTTCTATATGGAAGCTTCCATAGTAGCTACAGGAAAACCAGTTAAGACTTCTGCCAATGCTATCTTCTTGATATTCTATGATGAGAACAATACCCCATATGCTTACACTAAAGTTGGTACACGGCCTCAAGAAGGTAACTTAGATAGCTACGTAGCTTATGCTGGGGACTGGGGTAAACGTAAAGTAGTTAACAACGGAGCCAAGTGGAAAAACTTCTGGGGCAAGGTTTCAGTACAGCGTAGAGACAATCGCTGGAGACTTATCGTAGGCCAGTACAAAGACCGTAGATACAGCCCTTCACCTGAAGCTTCATTTAACTTTGGTCAAAACATGTTGAAAGATACTAGAGACACAGGTTGGTTCGACTTACCTCCAGAAACTTGGGGTAAGAAGTTTGCAAGGGTTGGAATCTTCTTCGGACAGTATTCACATCGACCTAAGTTAGGCCACTTATCAGTACGTAGACTAATTGTGTGGGAAAACCTTGAGGAGTATGGAGAAACTCCTTTAGAAGGAACTCCAATCATGTTCCATGAAGGTGACACAGTTGTAATTGACTCAAGCAAAGCTCAAACATACCTTAACGGAGAGCTTACTCCATCACTTGTAGACCCTATGACCGACTGGTTCCCAATTACCAAAGGTGATAACTACATTGGAGTAAACAACTTCAAAGGAAAGATTGACATAGTATATAACGAACGATTTAAATAA

Tertiary structure

PDB ID
d70af38fe3235da79fb8465d4fd2c7197f1b6aa921836b1f6786a132205f1db4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5822
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy of healthcare-associated infections Rubalskii,E.O., Kiseleva,I.A., Aleshkin,A.V., Efimova,O.G., Zulkarneev,E.R. and Borisova,O.Y. 2024-01 — GenBank