Protein

View in Explore
Genbank accession
XZP49838.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAWPLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAVVATLKQSKTDGYQPTVNDYVKFPGIESLLPGS
Physico‐chemical
properties
protein length:173 AA
molecular weight: 18760,05440 Da
isoelectric point:4,73357
aromaticity:0,10983
hydropathy:-0,05607

Domains

Domains [InterPro]
G3DSA:2.10.10.80
3–34
G3DSA:2.10.10.80 IPR011050
IPR040775
5–31
IPR040775 IPR012332
IPR015331
37–171
IPR015331
XZP49838.1
1 173
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GF04
[NCBI] 		3458938 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZP49838.1 [NCBI]
Genbank nucleotide accession
PX241559.1 [NCBI]
CDS location
range 3872 -> 4393
strand +
CDS
ATGGCGTGGCCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGCGTTCTTATTGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCCTGGACCGACGATAATCAGTGGATAACCGACCCCGCTGCGGTTGTAGCAACACTGAAACAGTCTAAAACAGATGGATACCAGCCGACAGTAAACGATTATGTCAAGTTCCCGGGAATAGAATCACTCCTCCCCGGAAGCTAA

Tertiary structure

PDB ID
8b5e5d2f55d65675b72eca9f8c43c6772a7d86b1a41e7a5b012f3687fbb48829
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8591
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50