Protein

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Genbank accession
AGE60470.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence Phold
Probability 1,00
Protein sequence
MADKKITALTDLGSGNIASADLLHVIDDPSGTPINKKISVASLFANVPTAVAINPGASANVTINANATDSDFIVSNDDEEAFRVDGANREVVINEASGQTDLRAETNSYSAALLVDASADQVQVNATPVFGLTQAISGAGAIDVVSAITEIVTTGTNAYTFADGVEGQIKFLVMKTDGGVGTVTPSNFASGSTIAFNDVGDTAFLLFTNGNWQLISHFGCTIA
Physico‐chemical
properties
protein length:223 AA
molecular weight: 22849,01540 Da
isoelectric point:4,06577
aromaticity:0,06278
hydropathy:0,20269

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC008M
[NCBI] 		1283076 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGE60470.1 [NCBI]
Genbank nucleotide accession
KC465899 [NCBI]
CDS location
range 112474 -> 113145
strand +
CDS
ATGGCTGACAAAAAAATAACAGCACTTACAGACCTGGGTTCAGGTAACATAGCAAGTGCTGACTTACTTCATGTAATTGATGATCCATCAGGAACACCAATTAACAAAAAAATCTCAGTAGCAAGTTTATTCGCAAACGTTCCAACTGCTGTAGCAATCAATCCAGGTGCAAGTGCTAATGTAACAATTAACGCTAACGCAACTGATAGTGACTTTATCGTTTCAAATGATGACGAAGAAGCATTTAGAGTTGATGGTGCTAACAGAGAAGTTGTAATTAACGAAGCTTCAGGTCAAACAGATTTAAGAGCAGAGACAAACTCTTACTCTGCTGCTTTACTTGTTGACGCTTCTGCTGACCAAGTACAAGTTAACGCAACTCCAGTTTTTGGATTAACACAAGCAATATCAGGCGCAGGTGCTATTGATGTTGTATCTGCTATTACTGAAATAGTAACTACAGGTACTAACGCATACACATTTGCTGACGGTGTTGAGGGACAAATTAAGTTCCTAGTTATGAAAACTGACGGTGGTGTAGGTACTGTAACTCCATCTAACTTTGCAAGTGGTTCTACAATCGCTTTCAATGATGTAGGTGATACAGCATTCTTACTATTCACTAACGGTAACTGGCAACTAATTTCACACTTTGGTTGTACAATAGCGTAA

Tertiary structure

PDB ID
c01b651bf4e6a18c2c3308836998d3547047e388dba5696d76a6169e988f9e91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50