Protein

View in Explore
Genbank accession
QXV74662.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MAGALVSTTIPNLINGVSQQPYALRLASQCELQENAHSSVVEGLRKRPGTVHRAKITNAPAGELFTHTINRDRTEQYEVMVGNGDLKVYDLKTGAEKTVSFPSGKAYLTAADPRSSFKAVTIADYTFLINKTITVAQDTTLSPSRSPEAVVWVKQGAYGTKYTVTLNGVSATVSTPDGSVATHINNIQTDVIASGLVTALNAAIGGFAFALNGSSIYIKRADNADFTINVTDSQGDQAMKLVKGTVQRFSDLPAKGFHGFGVEIVGDQSSSFDNYYVNFDTASGVASGVWVEGVKGGEAIRLKASTMAHALTRNADGTFTFKPVDWIDRKTGDLDSSPMPSFVGKKMNDIFFHRNRLGFIADENVVFSRSGDFFNFFRSSATQVLDTDPIDAAVSHIKVSILQHAIPFNETLLLFSEQTQFQLGASELLTPETIAINQTTEFECSLKARPVGSGRNIYFTFNRGNFSGLREYYVDGDTKTNDASDVTSHVPAYVPKDVSKMAASSSEDTIAMISESECNAIYVYKYYWNEQEKLQSAWYKWTFPATDTILSVEFVESNLYLVIRRADGVFLESMSVNPGYMDEGFEFGLNIDRKAKEDACTVSYNAVTNQTTVTPPYDMQADMLPASEAYVIISRNGDPIKKPGQVIPYTRSGNSMVVAGKLEKFFVGRSYVMRYRFSTFVIKEEAVGGGQMTVGEGRIQLRKATLTYDNSGYFRVEVTPFRRDTYQYVFSGRVIGSAKNVIGQVAVDKGRFSFPIMSKNDFVTVDIVNDTFLPCSFLSAEWEALYVIRSKRL
Physico‐chemical
properties
protein length:793 AA
molecular weight: 87260,25320 Da
isoelectric point:5,93322
aromaticity:0,10845
hydropathy:-0,18235

Domains

Domains [InterPro]
IPR058003
4–792
IPR058003
QXV74662.1
1 793
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph21
[NCBI] 		2836134 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74662.1 [NCBI]
Genbank nucleotide accession
MW980070 [NCBI]
CDS location
range 25106 -> 27487
strand +
CDS
ATGGCTGGCGCTCTCGTCTCTACGACCATCCCGAACCTGATCAACGGCGTCTCTCAGCAGCCCTATGCGCTCCGTTTGGCGAGCCAGTGCGAGCTGCAAGAGAATGCCCATAGCTCGGTCGTCGAGGGCCTCCGCAAGCGCCCCGGCACAGTCCACCGAGCGAAGATCACGAATGCCCCCGCAGGTGAGCTGTTCACGCATACCATCAACCGCGACCGCACAGAGCAGTACGAGGTCATGGTGGGCAATGGCGATCTGAAGGTCTACGATCTGAAGACTGGCGCTGAGAAGACCGTGTCGTTCCCAAGCGGCAAGGCCTACCTCACAGCAGCCGACCCTCGGTCCTCCTTCAAGGCCGTGACGATTGCCGACTATACCTTTCTGATCAACAAGACGATCACGGTCGCACAGGACACTACGCTCAGCCCCTCGCGCTCGCCTGAGGCTGTCGTCTGGGTAAAGCAGGGTGCCTACGGTACCAAATACACGGTGACCCTGAATGGCGTGAGCGCAACGGTATCGACGCCTGACGGCTCGGTCGCGACACACATCAACAACATCCAGACGGATGTCATCGCCTCCGGTCTGGTGACTGCCTTGAACGCCGCTATCGGTGGCTTTGCGTTCGCCCTGAACGGGTCGAGCATCTACATCAAGCGGGCCGACAATGCGGACTTCACGATCAACGTGACGGACAGCCAGGGCGACCAAGCGATGAAGCTGGTGAAGGGGACCGTCCAGCGTTTCTCTGATCTCCCGGCCAAGGGCTTTCACGGCTTCGGTGTTGAGATCGTCGGTGACCAGTCGTCCTCTTTCGACAACTACTACGTCAACTTCGACACGGCCTCAGGCGTTGCCTCGGGTGTCTGGGTCGAGGGTGTGAAGGGTGGTGAAGCAATCCGCCTCAAGGCCTCCACAATGGCCCATGCGCTGACCCGTAACGCTGACGGTACGTTCACCTTTAAGCCGGTGGATTGGATTGACCGTAAGACCGGCGATCTGGACAGCTCCCCAATGCCATCCTTCGTGGGTAAGAAGATGAACGATATCTTCTTCCATCGAAACCGTCTGGGCTTCATCGCTGACGAGAACGTGGTCTTCTCCCGCTCGGGTGACTTTTTCAATTTCTTCCGCAGCTCGGCCACGCAGGTTCTCGATACCGACCCCATCGACGCTGCCGTATCGCACATCAAGGTCTCCATCCTGCAGCATGCCATCCCGTTCAACGAGACGCTGCTATTGTTCTCGGAGCAGACCCAGTTCCAGCTCGGGGCCTCGGAGCTGCTCACGCCAGAGACCATTGCGATCAACCAGACGACCGAGTTCGAATGCTCACTCAAGGCCCGCCCAGTGGGTTCCGGTCGTAACATTTACTTCACGTTCAATCGGGGCAACTTCTCAGGCCTGCGGGAGTACTACGTTGATGGTGACACGAAGACGAACGATGCGTCTGACGTGACCTCGCACGTCCCGGCCTACGTGCCGAAGGATGTCTCGAAGATGGCTGCCTCCTCGTCTGAGGACACCATCGCGATGATTAGTGAGAGCGAGTGCAACGCGATCTACGTCTACAAGTATTATTGGAACGAGCAGGAGAAGCTGCAGTCCGCGTGGTACAAGTGGACGTTCCCGGCCACGGACACGATCCTCTCGGTCGAGTTCGTCGAGAGTAACCTGTACCTCGTCATCCGGCGAGCTGATGGCGTGTTCCTTGAGAGCATGTCGGTCAACCCCGGCTACATGGACGAGGGCTTTGAATTTGGCCTGAACATCGACCGTAAGGCCAAGGAAGATGCCTGCACGGTGTCCTACAATGCCGTGACGAATCAGACCACGGTCACGCCCCCTTACGATATGCAAGCAGATATGCTCCCAGCGAGCGAGGCCTACGTGATCATCTCCCGCAACGGAGACCCAATCAAGAAGCCGGGACAGGTCATCCCATACACCCGAAGTGGCAACTCCATGGTGGTGGCAGGGAAGCTGGAAAAGTTCTTCGTGGGTCGCTCCTACGTGATGCGCTACCGCTTCTCGACCTTCGTCATAAAGGAGGAGGCCGTGGGCGGTGGTCAGATGACCGTGGGCGAGGGGCGCATCCAGCTACGCAAGGCCACGCTGACCTACGACAACTCAGGCTACTTCCGTGTCGAGGTAACGCCCTTCCGCAGGGATACCTACCAGTACGTCTTCTCGGGCCGAGTGATCGGCTCAGCCAAGAACGTGATCGGGCAGGTGGCTGTCGATAAGGGCCGCTTCTCGTTCCCGATCATGTCGAAGAACGACTTCGTCACGGTCGATATCGTCAATGACACATTCCTCCCTTGCTCGTTCCTGAGCGCTGAGTGGGAGGCCCTTTACGTCATCCGTTCCAAGAGGTTGTGA

Tertiary structure

PDB ID
24879ea34a7664c3d355419dd92720aa66a05a151bba926f1aa5d23c168c09b0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2593
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank