Protein

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Genbank accession
QOI66150.1 [GenBank]
Protein name
head fiber protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYTPTTWNNDDVITAEKLNKLEQGVKNEQVGPAGPAGPAGKKGDQGVAGPKGDKGEPGVQGPAGPSYTLLAANKTTLGGVKQMALIEDLSTETATDLKDKINAILAEMKKQGIMANS
Physico‐chemical
properties
protein length:118 AA
molecular weight: 12134,59500 Da
isoelectric point:5,39751
aromaticity:0,02542
hydropathy:-0,53051

Domains

Domains [InterPro]
IPR022741
64–116
IPR022741
G3DSA:6.10.140.1630
67–118
G3DSA:6.10.140.1630
QOI66150.1
1 118
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruminococcus phage phiRg519T2
[NCBI] 		2772519 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66150.1 [NCBI]
Genbank nucleotide accession
MT980838 [NCBI]
CDS location
range 5377 -> 5733
strand +
CDS
ATGGCATATACACCAACTACATGGAATAATGATGACGTTATTACAGCAGAGAAACTGAATAAGTTAGAGCAGGGCGTGAAGAATGAGCAGGTAGGACCAGCAGGACCAGCAGGACCAGCAGGCAAAAAAGGCGATCAAGGAGTAGCAGGACCGAAAGGAGACAAGGGAGAACCGGGCGTACAGGGACCGGCAGGACCAAGCTACACTCTTCTGGCGGCGAATAAAACAACGCTCGGCGGTGTGAAACAGATGGCTTTGATCGAAGATTTGTCCACAGAAACAGCAACTGACCTGAAAGATAAAATCAATGCGATTCTTGCGGAGATGAAAAAACAGGGGATCATGGCGAATTCATAA

Tertiary structure

PDB ID
d8939de88dd93c2ebd0503d69c0ae569b29c9329f46440ccaedd4596eda36c66
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temperate bacteriophages infecting mucin-degrading bacterium Ruminococcus gnavus from the human gut Khokhlova,E.V., Shkoporov,A.N., Draper,L.A., Kingston,A.R., Forde,A., Ross,R.P. and Hill,C. 2023-03-30 — GenBank