Protein

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Genbank accession
XZE13823.1 [GenBank]
Protein name
baseplate structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MYIRPINYELQWCVAGVVNPPTQEKIRYGWSGAEKPMVEHLNWMFNRIDGAIGYFLQGIPRWGNEVEYSVHDMINFNGSLFICIEAHTNQPTTNKTYWKEAFFSTNAGDSLAEEIRKMKEEDGYLTKYLKISNPITPNRMQAGSYSAKVGLPATSAFNMGYSFEGANTTGMYLNGTALTFRVAGITRAHIPNAVPALDDQTTALATTDWVQRLIESKIGNIDLTASRLPVGSVYFSTNDQNPNATLGYGTWVRFAEGQVIVGKSVTEYHPAWTKATYNTFGTYTHQLTKAELPKFANSNMRLQTRNWQYGSGKRPDEGFIPNWVDANNLEIGNDEPHNNVQPSIVVNIWRRTA
Physico‐chemical
properties
protein length:353 AA
molecular weight: 39705,12930 Da
isoelectric point:6,66780
aromaticity:0,11898
hydropathy:-0,44731

Domains

Domains [InterPro]
G3DSA:2.10.10.20
59–101
G3DSA:2.10.10.20 IPR053827
XZE13823.1
1 353
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AciJM_313
[NCBI] 		3456261 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZE13823.1 [NCBI]
Genbank nucleotide accession
PX050566 [NCBI]
CDS location
range 56216 -> 57277
strand -
CDS
ATGTATATCAGACCTATAAATTATGAGCTACAGTGGTGTGTAGCTGGTGTCGTAAACCCACCTACTCAAGAGAAGATTAGGTATGGTTGGAGTGGCGCTGAGAAACCAATGGTTGAACACCTTAACTGGATGTTTAACAGAATTGATGGTGCAATTGGATACTTCCTACAAGGTATTCCAAGATGGGGTAATGAGGTTGAGTATTCAGTTCATGACATGATTAACTTTAACGGTTCATTATTTATCTGTATTGAAGCACACACAAATCAACCAACAACAAATAAAACATACTGGAAAGAAGCCTTCTTCTCAACAAACGCTGGTGATTCTCTTGCAGAAGAAATCAGAAAGATGAAAGAAGAAGATGGATACCTAACTAAATACCTAAAGATCAGTAATCCTATTACACCAAATAGAATGCAAGCTGGTAGTTATAGTGCGAAGGTTGGATTACCAGCAACATCGGCTTTCAACATGGGTTACTCATTTGAAGGCGCTAACACAACTGGTATGTACTTAAATGGTACAGCATTGACATTCAGAGTTGCTGGAATTACCAGAGCGCACATTCCAAATGCTGTTCCAGCACTTGATGATCAAACAACAGCTTTAGCTACAACGGATTGGGTTCAAAGATTAATTGAATCTAAGATTGGAAACATTGACTTAACTGCGAGTCGTTTACCAGTCGGATCTGTTTACTTTAGCACAAATGATCAAAACCCAAATGCTACACTTGGCTATGGTACATGGGTGAGGTTTGCGGAAGGTCAAGTTATTGTTGGTAAGAGTGTCACAGAATATCATCCAGCTTGGACTAAGGCAACTTACAACACCTTTGGTACATACACACATCAATTAACTAAAGCTGAATTACCAAAGTTTGCAAACTCAAACATGAGATTACAAACAAGAAACTGGCAGTACGGTAGTGGTAAGCGACCAGATGAAGGATTCATTCCAAACTGGGTGGATGCAAACAACCTTGAGATTGGTAATGACGAACCTCACAACAACGTTCAACCATCTATAGTGGTTAACATCTGGCGTAGAACAGCGTAA

Tertiary structure

PDB ID
cecafb4bb39ce98fdd2dbaeeb1577cf36d5674cdda9e1a8aebd3020a298b975f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Acinetobacter Johnsonii Phage AciJ_313 is Presumably a Representative of a New Family Ponomarev,A.L., Kozlova,Y.N., Ushakova,T.A., Fedorets,V.A., Bardasheva,A.V., Babkin,I.V., Morozova,V.V. and Tikunova,N.V. 2023 — GenBank