Protein

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Genbank accession
YP_012791983.1 [GenBank]
Protein name
tail fiber-like protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MPTRPIFSKADIASNNAVTSGNALSAELATQAFPESQQKRKFFDLFPLNKGFTSGATPTELFIDGVQNFRFRVAERSVVTIKAIGSYCPNVDGSMTGFELTVVARNVNGFPLILGAQLQAKYPGASTASIVASVDNATQSLIFTATGIAGDGNGRWAMSIIGVSEVTDIG
Physico‐chemical
properties
protein length:170 AA
molecular weight: 17885,03270 Da
isoelectric point:6,22639
aromaticity:0,08824
hydropathy:0,11765

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage LPP-1
[NCBI] 		2996049 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012791983.1 [NCBI]
Genbank nucleotide accession
NC_111528.1 [NCBI]
CDS location
range 38597 -> 39109
strand -
CDS
ATGCCTACACGTCCAATTTTCAGTAAAGCTGACATCGCTTCCAATAACGCGGTTACTTCGGGTAACGCTTTAAGCGCTGAGCTTGCAACCCAAGCTTTCCCTGAGTCTCAGCAGAAGCGCAAGTTCTTCGACTTGTTCCCGCTAAACAAGGGTTTTACCAGTGGTGCTACCCCCACTGAGTTGTTCATTGATGGGGTGCAAAACTTCCGCTTCCGAGTCGCCGAGCGCTCTGTCGTCACCATTAAAGCCATCGGTTCTTACTGCCCGAACGTTGATGGTTCAATGACCGGGTTTGAACTCACGGTTGTTGCCCGCAACGTTAACGGCTTCCCCCTCATTCTGGGTGCTCAGCTTCAGGCTAAGTACCCAGGTGCAAGCACCGCCTCCATCGTAGCGTCGGTTGATAATGCCACTCAGTCGCTCATCTTTACCGCTACCGGTATTGCTGGCGACGGCAACGGTCGTTGGGCAATGTCCATCATCGGTGTAAGCGAAGTCACCGATATCGGTTAA

Tertiary structure

PDB ID
e4633a66d774f03856d0341b841a9f54d92adbffc2436057956f03a3fae27512
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6401
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing the genomes of LPP-1, the first isolated cyanophage, and its relative LPP-2 reveal different integration mechanisms in closely related phages Shaalan,H., Cattan-Tsaushu,E., Li,K. and Avrani,S. 2023 — GenBank