Protein

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Genbank accession
AEB71698.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MEFIVIQGDKTLNLNNRKPLCSVTKAEHRQSLLSEDVINITVESKTPLALQVGNYIEYENRRYTLNSAPKVKKEQGYYTYDLVFEGVQYLLRDKVYFNLDAQGFQNTADFPLTGEINIFLTTLITNINSISDFTWVLGEYPQNTETKTLTFNNENCLAVLQKICQEYDTEFEIKQDLERKSYTLNIKKIGETLNQTFEYGKGNGLYSLSRVNVNDNVITRLYVFGSTNNIKSGYRDYSQRLRLPISHGKEYIQDNAKVKLFGLKEGVKNFDDIKPTFKGIVSGVTNLENGSQEIEVSNMDFDLNETDSNGTKYLLNDTPAKLHINKGNLAGYEFELLKNGGYNHATKTFRVKQFTDERGQKFPEAGSVFSFSVGDEFTLLDIAMPEQYITNAENKLLEEGQKEYEKQSVNNLKYNLELDPLYLQQIGANTSIFFKIGDYIRVIDEPLKIDKTTRIVDITRDLLDEYNYKIGIADTYEISFVASLLTDIKDTKTVIKTQEQINRRNYLSGYRNQKEFEENVFDADGNFDPTKIRHQSIEAYMLSTGARSQQFALENISLNPNIEGNPARTFISGGKLVHFSLEDDIREWNILPYRRNDLLNQVYYVYAKCSRGNSMGVWHITTEQIRFDSRSDYYYFLCYLLYTPKDGKREAEAMYGNVFMHGGQITAGRIKSLNGQTYFDLDSGEIAGTIKFRSSTGTYEDVGNAITLLNNANANLGTMAWQNSVEKAMLGDTIVQGGYIKTELLNASAIVSNGGGATSAELNNAINSIIIGGRNLVLDSKKTITHSDYNFSYEFEDDFSKIQGQTITISIDIEVSDITSGVRIGFEPSFLFQDGSRMYLRCWKYLNLGESFKGRISKTYTIPNKPIQSMEQKGMYVQVQGRITKVSNPKFELGNKATDWTPNPLDIEVQFANLQQGIANMQTSLSDVKTKTDNFASIQGGLMMANLMSVGSNQANQNAFISGITDEGAMSVRFGAGSNYANKHNAPFRVLDNGKVYGSDMEITGGKIARFNISGNTLSGQGIADPNDYLEIKSSGSILSYKKSLSSGRESYALINNDDSILNGNKNNILRLWGRDVNNYTPYNALSIRADGQYATALNIESGDIRVGGEVGYTGELFLGGVWLTIRKGIITNYS
Physico‐chemical
properties
protein length:1135 AA
molecular weight: 127609,57530 Da
isoelectric point:5,39376
aromaticity:0,10485
hydropathy:-0,44987

Domains

Domains [InterPro]
IPR007119
135–260
IPR007119
AEB71698.1
1 1135
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Riemerella phage RAP44
[NCBI] 		936152 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Riemerella anatipestifer
[NCBI] 		34085 Bacteria > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Riemerella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEB71698.1 [NCBI]
Genbank nucleotide accession
HQ396194 [NCBI]
CDS location
range 2961 -> 6368
strand -
CDS
ATGGAGTTTATAGTCATACAAGGAGATAAGACCCTTAACCTTAATAATAGAAAACCTTTATGTTCGGTTACCAAAGCCGAACATAGACAGTCTTTGTTATCAGAAGATGTAATAAATATTACTGTAGAAAGTAAAACTCCTCTTGCTTTGCAAGTGGGCAACTATATAGAATATGAGAACCGAAGATATACACTCAACTCTGCACCAAAGGTAAAAAAGGAGCAGGGGTATTATACCTATGATTTAGTTTTTGAGGGCGTACAGTATCTATTGAGAGATAAGGTGTATTTCAACTTGGACGCTCAAGGCTTCCAAAATACGGCGGATTTTCCTTTAACGGGAGAAATAAACATTTTCCTTACGACGCTAATCACAAATATCAATTCCATTTCAGATTTTACTTGGGTTTTGGGTGAATATCCACAAAATACGGAAACTAAAACGCTGACTTTTAATAATGAAAACTGCCTCGCTGTTTTACAAAAAATCTGTCAGGAATACGATACCGAGTTTGAAATCAAGCAGGATTTAGAGAGAAAATCTTACACGCTCAACATTAAGAAAATAGGCGAAACTTTAAACCAAACCTTTGAATATGGAAAAGGAAATGGGCTTTATTCTTTAAGTAGAGTAAATGTGAATGATAATGTGATTACCCGTCTTTATGTTTTCGGCTCAACGAATAATATTAAAAGCGGATACCGAGATTATTCACAGCGTTTGCGATTGCCTATTTCTCACGGAAAGGAATATATTCAGGACAATGCTAAGGTAAAATTGTTCGGCTTAAAAGAGGGCGTTAAAAATTTTGACGACATCAAACCTACTTTTAAGGGGATAGTATCAGGCGTTACCAATTTGGAAAACGGCTCGCAAGAGATAGAAGTTTCTAATATGGACTTTGACCTGAACGAAACTGACAGCAACGGAACAAAGTATTTATTAAACGATACTCCCGCGAAGCTCCATATAAACAAAGGAAATTTGGCAGGATATGAATTTGAGTTGCTTAAAAACGGAGGCTACAACCACGCCACTAAGACTTTTAGAGTAAAGCAATTTACAGACGAAAGAGGACAAAAGTTTCCAGAAGCAGGTTCCGTGTTTTCATTTTCGGTTGGAGATGAGTTCACATTGTTAGATATTGCAATGCCCGAACAGTACATTACAAATGCCGAAAACAAACTCCTTGAAGAGGGACAAAAGGAATACGAAAAACAATCGGTAAACAACCTTAAATATAATTTAGAGTTAGACCCTCTGTATCTGCAACAGATAGGGGCTAATACGTCTATTTTCTTTAAAATTGGGGATTATATCCGTGTGATAGATGAACCGCTTAAAATAGATAAAACGACACGCATAGTAGATATTACGAGGGACTTATTAGACGAATATAATTACAAAATAGGCATTGCGGACACTTACGAAATCAGCTTTGTAGCAAGTCTGCTTACCGATATTAAAGACACTAAAACGGTTATAAAAACGCAGGAACAAATTAACCGACGAAACTATTTGAGCGGCTACCGTAATCAAAAGGAGTTTGAAGAAAATGTTTTTGATGCAGACGGCAATTTTGACCCAACCAAAATTAGACATCAAAGTATTGAAGCTTATATGCTTTCAACGGGGGCAAGAAGCCAACAATTTGCATTAGAAAATATAAGTCTGAATCCTAACATAGAGGGAAATCCTGCAAGAACATTTATTAGCGGTGGGAAATTAGTTCATTTTTCCTTAGAAGACGATATTAGAGAGTGGAACATATTGCCATACAGACGTAATGACCTGTTAAATCAAGTTTACTATGTCTATGCAAAATGTTCAAGAGGAAATAGTATGGGGGTATGGCATATCACCACCGAGCAGATAAGGTTTGATAGTCGGTCAGATTATTATTATTTCTTGTGTTACTTACTCTACACACCAAAAGACGGTAAGCGAGAAGCAGAAGCAATGTACGGCAATGTGTTTATGCACGGAGGGCAAATAACGGCAGGGAGAATTAAATCGCTCAACGGACAAACCTACTTTGACTTGGATAGTGGGGAAATAGCAGGAACGATTAAGTTTAGAAGCTCAACAGGAACTTATGAAGATGTTGGTAATGCTATTACACTTCTCAATAATGCTAATGCTAATCTCGGCACAATGGCGTGGCAGAACTCGGTAGAAAAAGCGATGTTGGGCGATACCATAGTACAAGGAGGCTATATCAAAACAGAGCTATTAAACGCTTCGGCAATAGTGAGTAATGGCGGAGGAGCGACTTCGGCAGAATTAAATAATGCCATCAATAGTATCATTATCGGGGGTCGGAATTTAGTATTAGATTCTAAGAAAACGATTACCCATTCAGATTATAATTTTAGCTATGAGTTTGAAGACGATTTTTCTAAAATACAAGGGCAGACAATCACTATTTCAATAGATATAGAGGTTTCGGATATAACTTCTGGAGTTAGAATAGGTTTTGAACCATCGTTTTTATTTCAAGACGGAAGTAGAATGTATTTGAGATGTTGGAAATACTTGAACTTGGGAGAAAGTTTTAAAGGGCGTATTTCAAAAACATACACTATTCCCAACAAACCAATTCAATCAATGGAACAAAAAGGTATGTATGTACAGGTTCAGGGGAGAATAACAAAAGTATCAAATCCAAAATTTGAATTGGGTAACAAAGCAACGGATTGGACACCAAATCCGTTGGATATAGAGGTACAGTTTGCCAACCTTCAACAAGGAATAGCTAATATGCAAACCTCTTTGTCTGATGTGAAGACCAAGACCGATAACTTCGCATCTATCCAAGGCGGGTTGATGATGGCTAATTTAATGAGTGTAGGAAGCAACCAAGCCAATCAAAATGCTTTTATTAGTGGTATTACCGACGAGGGAGCAATGAGCGTGAGATTTGGAGCAGGTAGCAATTATGCCAATAAACATAATGCACCATTTAGGGTGCTGGATAATGGGAAAGTTTATGGCTCTGATATGGAAATTACAGGTGGTAAAATAGCAAGGTTCAATATTAGCGGAAATACACTTTCGGGGCAAGGAATAGCAGACCCAAACGACTATTTAGAAATAAAGTCATCTGGAAGCATACTTTCATATAAAAAAAGTCTTTCATCTGGGAGAGAAAGCTATGCTCTCATCAATAATGATGATAGTATTTTAAACGGAAATAAAAACAATATACTTCGGCTCTGGGGGCGTGATGTGAACAATTATACGCCCTACAACGCCCTATCTATAAGGGCTGACGGACAGTATGCTACTGCCTTAAATATAGAATCGGGAGATATTCGTGTGGGTGGAGAGGTAGGATATACAGGAGAATTATTTTTGGGGGGAGTATGGCTTACCATTAGAAAAGGTATAATAACAAATTATTCATAA

Tertiary structure

PDB ID
0362fba1ed3d0a07ad2724c3436fbe4d22aefe99c2e8a84662d1e334d014d67d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of the virulent bacteriophage RAP44 of Riemerella anatipestifer Cheng,L.F., Chen,H.M., Zheng,T., Fu,G.H., Shi,S.H., Wan,C.H. and Huang,Y. 2012 22856189 GenBank