Protein

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Genbank accession
QBX31885.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MSRFSYKGVDLSPFLTILRIERTVGNERQIQTNNAPKIGVNLQDVMFGAKIIKVKVSLATRAITPEFVDTVAYPTIATENINKLREQVSGLLHTDSEQRLELPDEPDRYYMAIPKGDINLEGIADWYDETTIEFFVPDGVAHSTTYRKFDNGAVSSDKVTFDIVNNGNVPAFPIVTVKHHAENGYIGVVNTSGALEIGDREEADKEVVRQSELLFDYRDSKITTGLSAATPNIAILNDTSQNLRGAVRSVDWQGRKHLFLQSPGGTAGNNAGSLTWDIPADSSGATGSLNDYIWWRQVFWLGAANQYGFIKLTVSDEQGRFLYGVETYKRAYGLGCEYNFFVANGKGGFHTIKQWTFLGTHENHHNPFNEPRGWSDIKRNDDTITVYWWGSYNTFTIPEIKGRKSAKVHVAFGAIGNKPLVTRMYLDGLMYRKDFVAVTKDIPNRYPIGSSVVLNSENDTVTVDGLERIVDIVHGSTFLTIPPGKSTLEVFSSSWVRTKPTVKIEFEERYL
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57209,60460 Da
isoelectric point:5,93873
aromaticity:0,10959
hydropathy:-0,33855

Domains

Domains [InterPro]
G3DSA:2.40.30.200
1–142
G3DSA:2.40.30.200 IPR054738
IPR006520
4–142
IPR006520
IPR008841
30–136
IPR008841
QBX31885.1
1 511
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan84
[NCBI] 		2548309 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX31885.1 [NCBI]
Genbank nucleotide accession
MK449008 [NCBI]
CDS location
range 34851 -> 36386
strand +
CDS
TTGTCTAGGTTTTCATACAAGGGCGTTGATTTATCGCCCTTTTTAACTATTTTAAGGATTGAGCGGACTGTCGGTAATGAAAGGCAGATACAGACCAACAATGCTCCCAAAATCGGCGTCAATCTCCAAGATGTCATGTTCGGAGCTAAGATCATTAAGGTTAAGGTCAGTCTGGCAACAAGGGCAATAACTCCAGAATTTGTTGATACGGTAGCTTACCCTACTATCGCTACTGAAAACATCAACAAGTTGCGGGAGCAAGTGTCAGGACTGTTGCATACGGACAGCGAGCAGAGATTAGAGCTTCCAGATGAACCTGATAGGTACTATATGGCTATCCCGAAAGGTGATATAAACCTAGAGGGAATTGCGGACTGGTACGATGAAACGACCATTGAGTTTTTTGTACCTGACGGGGTTGCGCACAGCACCACCTACCGCAAGTTCGACAACGGTGCGGTGTCGTCTGATAAGGTTACTTTTGATATAGTCAATAATGGCAACGTGCCGGCTTTTCCTATCGTTACAGTTAAGCATCATGCAGAAAATGGTTACATTGGCGTGGTGAATACGAGTGGAGCTTTGGAAATCGGAGATCGTGAAGAAGCTGATAAAGAAGTTGTCAGACAGTCAGAGTTACTCTTTGATTATCGAGATAGTAAAATTACAACTGGCTTAAGTGCGGCAACGCCGAACATTGCTATCCTAAACGATACATCACAGAATCTTAGGGGTGCTGTGAGAAGCGTAGACTGGCAAGGCCGCAAGCATTTGTTCCTACAAAGTCCCGGAGGAACTGCTGGAAACAATGCAGGGAGTTTGACGTGGGATATACCAGCTGACAGCTCAGGAGCTACTGGCTCTCTGAATGATTACATCTGGTGGAGGCAAGTCTTTTGGCTTGGTGCCGCTAACCAATACGGTTTTATTAAGTTAACCGTCTCTGATGAACAGGGACGGTTTTTGTACGGTGTAGAAACCTATAAAAGAGCCTATGGACTGGGCTGTGAGTATAATTTCTTTGTCGCTAATGGTAAGGGTGGATTTCATACTATCAAGCAGTGGACTTTTTTAGGAACACATGAAAATCATCATAACCCATTCAATGAACCGAGAGGCTGGTCAGATATAAAGCGGAATGATGATACAATAACCGTTTATTGGTGGGGTTCTTATAATACCTTCACTATTCCTGAAATCAAGGGTAGGAAGTCGGCTAAAGTCCATGTGGCATTTGGCGCTATAGGAAACAAGCCTTTGGTTACTCGTATGTATCTTGATGGTCTGATGTATCGTAAGGACTTTGTGGCTGTTACCAAAGATATTCCTAATCGTTATCCAATCGGGTCTAGCGTGGTGTTAAATAGCGAAAATGACACGGTGACTGTGGACGGTTTGGAGCGGATTGTAGATATTGTCCACGGCTCTACATTTCTTACTATCCCACCCGGGAAATCCACTCTTGAAGTATTTTCTTCTAGCTGGGTCAGGACAAAACCGACCGTCAAGATAGAATTTGAAGAGAGGTACTTATAG

Tertiary structure

PDB ID
1a137dcef6095bf28d3d4d7d045bee6c7b770233d61ef8f372f67be7c62db0b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank