Protein

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Genbank accession
AFU63931.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MADLKANSTVGGAPIWHKGNFPLSPVGDTLLYKTFKVYTEFDKPQAVDNDFVSKAAGGEYLKNVNFKEGLSFSDKDGASVFIGVPKNTTATATYTASIKLTGQFALETPDNKPFIIFDPNESFSPDVYRLTVMGDMLSRQIYDESGRVFSPGNTPSKAQVGLDLVDNAKQVQLEKSGVQTMTGVLAAPNFISTNPATADNHVARFDQIVIKDSIQDFGYYS
Physico‐chemical
properties
protein length:221 AA
molecular weight: 24014,64050 Da
isoelectric point:5,02755
aromaticity:0,10860
hydropathy:-0,27104

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STML-198
[NCBI] 		1204531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU63931.1 [NCBI]
Genbank nucleotide accession
JX181825 [NCBI]
CDS location
range 28985 -> 29650
strand +
CDS
ATGGCCGATTTAAAAGCAAATAGTACAGTAGGCGGAGCTCCGATATGGCATAAAGGAAATTTTCCTTTGTCTCCGGTAGGTGATACGCTACTTTATAAGACTTTCAAAGTCTATACAGAATTCGATAAACCTCAAGCAGTAGATAACGATTTTGTTTCTAAAGCCGCTGGAGGAGAATATTTAAAAAACGTTAATTTTAAAGAAGGCTTATCATTTAGCGACAAAGATGGAGCTTCTGTTTTTATTGGTGTTCCTAAAAATACTACAGCAACAGCTACTTATACCGCATCAATAAAATTAACCGGGCAATTCGCTTTAGAAACTCCTGATAATAAACCATTTATCATATTTGACCCAAACGAGTCATTTAGCCCTGATGTATATCGCTTAACTGTTATGGGTGATATGCTTTCTCGTCAAATTTATGATGAATCTGGAAGAGTTTTTTCTCCTGGGAATACTCCGTCAAAAGCGCAAGTTGGTTTAGATTTAGTCGATAACGCTAAGCAAGTTCAACTTGAAAAATCCGGTGTTCAAACAATGACCGGGGTTTTGGCTGCTCCAAACTTTATAAGTACCAATCCGGCAACGGCAGATAATCATGTAGCTCGTTTTGACCAGATTGTAATAAAAGACTCAATTCAAGATTTTGGATATTATAGTTAA

Tertiary structure

PDB ID
ed927a696d1ace10558dbfe51eb7b9c7c52db0160b35a0ba7371e7c3a486a29b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank